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Detailed information on CNT30132971


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221290Lolium perenneHordeum vulgare21.7155.7193.44122forward

Expression of CNT30132971

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHRPWMTSSALFLAKASGSADSPAVSQP*

>peptide 2 (32 aa)
DRTKKSLRFLNSENNSRDHCLQFACMTLDKQE*

Sequence

>CNT30132971
GATCGAACCAAAAAATCCTTGAGATTTCTGAATTCTGAGAACAATTCAAGAGACCATTGTTTGCAATTTGCGTGCATGACACTCGACAAACAAGAGTAGT
TTACACTTTACAAGCGGCGGGGCGCCGTGCTGCGTCGACCGGTCCACGACTTAAGAGCCAGGAGCGAACTTGGTGGCGAAAACCCAGGCATTGTTGGCGA
CAGGGTCGTCGAGGTGGTCGAAGAGGTTCTCCAACGGGCCCTTGCCGGTGACGATGGCTTGCACGAAAAACCCAAACATGGAGAACATGGCGAGCCGGCC
TTGAACCAGACGGGCTCCTTGAACTCGACGCCCACCCACTTCTGGAGCACCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCACCGGCCGTGGA
TGACCTCGAGCGCCCTGTTCCTGGCGAAGGCCTCCGGGTCGGCGGATAGCCCGGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGTTGAGGTACGA
CGGCGTCTGCGCGGAGAAAGGGCCCAGGTACTTGACGCGATCCGGGCCGTACCACAAGTCGT