Detailed information on CNT301326


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7Y052|CALM_EUPCH, E-value = 2e-31

BLAST vs NONCODE:
NONPOPT000052, E-value = 2e-32

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678586Zea maysSetaria viridis56.5664.4595.36194forward
CNT30378266Zea maysArabidopsis thaliana23.3223.469080forward
CNT30487977Zea maysOlea europaea31.241.1586.92107forward
CNT30504265Zea maysNicotiana attenuata55.161.9782.01189forward
CNT30621990Zea maysCajanus cajan27.4114.290.4394forward
CNT30596276Zea maysOryza meridionalis20.4112.5794.2970forward
CNT30483255Zea maysChara braunii34.6910.784.87119forward
CNT3039761Zea maysMarchantia polymorpha32.369.9988.29111forward

Expression of CNT301326

Peptides detected in this lncRNA

>peptide 1 (61 aa)
LKRSAATASTVSSWGKRRKQDLHCLSNMRCTVWFPPSIPAGYYTVTAGFTHLAIMTLTNSS*

>peptide 2 (54 aa)
SNVQQLQLVRFLHGENEGNKTCIAFLICDARFGFLLQFPRGTIPLPQALLTWPS*

>peptide 3 (84 aa)
MHGLVSSFNSRGVLYRYRRLYSLGHHDLDELLVVDLAITIDVGLADHLIDLLVGQLLAEVEELREVDGAVAVRIDLVDHVLELSL

Sequence

>CNT301326
ACTCAAACGTTCAGCAGCTACAGCTAGTACGGTTTCTTCATGGGGAAAACGAAGGAAACAAGACCTGCATTGCCTTTCTAATATGCGATGCACGGTTTGG
TTTCCTCCTTCAATTCCCGCGGGGTACTATACCGTTACCGCAGGCTTTACTCACTTGGCCATCATGACCTTGACGAACTCCTCGTAGTTGATCTGGCCAT
CACCATCGACGTCGGCCTCGCGGATCATCTCATCGACCTCCTCGTCGGTCAGCTTCTCGCCGAGGTTGAGGAACTCCGGGAAGTCGATGGTGCCGTTGCC
GTCCGCATCGACCTCGTTGATCATGTCCTGGAGCTCAGCCTCG