Detailed information on CNT3013256


BLAST search results

BLAST vs Swiss-Prot:
sp|P36183|ENPL_HORVU, E-value = 1e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675843Zea maysSetaria viridis22.9621.3893.3390forward
CNT30381504Zea maysManihot esculenta22.1910.1588.5187forward
CNT30402788Zea maysBeta vulgaris22.967.1587.7890forward
CNT30711421Zea maysGlycine max19.3926.4889.4776forward
CNT30158908Zea maysPistacia vera22.965.5183.3390forward
CNT30305074Zea maysTriticum aestivum22.9614.3594.4490forward
CNT30652736Zea maysRosa chinensis22.9615.5484.4490forward
CNT3055928Zea maysAmborella trichopoda22.710.1487.6489forward
CNT30558289Zea maysPanicum hallii21.9414.6584.8886forward
CNT30724231Zea maysLupinus angustifolius17.8628.2388.5770forward

Expression of CNT3013256

Peptides detected in this lncRNA

>peptide 1 (30 aa)
VIRSLVDLLHLAFAGVILQRSSPLPSCSHQ*

>peptide 2 (32 aa)
SDPKLSRPPPSCFRRRHPPAEFSTAFLLSPVI*

Sequence

>CNT3013256
CAGTGATCCGAAGCTTAGTCGACCTCCTCCATCTTGCTTTCGCCGGCGTCATCCTCCAGCGGAGTTCTCCACTGCCTTCTTGCTCTCACCAGTGATATAG
TAGATGTCGTTCTGTCCCTCCTTCATCCTCGTCACATAATCCTTGAGGCTGAGCAGCTGGTTGATCTCAGCCTGAAAGGCGAAGGTCTCCGTCTCTGTCG
CCATGGCGCCCTGACTCTTGAGCTCTGAAGCTTGCAGCAGTCGGCTAGGGATGGAGGCGTTGTCGGATCGCGGCTAGGGTTGGAGCCTTGGAGGTTTTCC
GAATCGAGAGGGGCAGCGAGGATTGAGGTAGTGGGGTATTTATTTGGCGCCGCGCTTCTAGAAAGTTCGACATAGACCCAGACTCGTTCGCT