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Detailed information on CNT30132362


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7Y0F2|NRX12_ORYSJ, E-value = 3e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691748Lolium perenneOryza sativa17.5523.0784.32185forward
CNT30252286Lolium perenneAvena sativa41.3799.3292.66436forward
CNT30361378Lolium perenneSorghum bicolor19.4551.2583.9205forward
CNT30100808Lolium perenneOryza rufipogon43.9392.0581.86463forward

Expression of CNT30132362

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MDSLIILSCLFLFFQFTDPLGRKRISFYAIFTHKLDSIPSKNFPSFCIKDNEVWNAPDLKPPIKTFTAFRVRERDCQPRHLCEVGVECLLILIA*

>peptide 2 (56 aa)
MPYSLTNSTPSPVRTSPVFASRITRCGMPLTSNLPSRPLRPSESEKGTASHGIFAK*

>peptide 3 (46 aa)
MHQVLCIQEMHAAPSIPKCKVHFNSLRKKASTRKLLSRYVVYMTQN*

Sequence

>CNT30132362
TACCTTGTCCCCCTTGTTTGAAATTACATAGTCGCGCTCCGGTGTACCAAGCACGCTATGGATAGTTTGATTATCCTTAGCTGCCTTTTCTTGTTCTTTC
AATTCACTGATCCTCTCGGGCGTAAAAGGATAAGCTTCTATGCCATATTCACTCACAAACTCGACTCCATCCCCAGTAAGAACTTCCCCAGTTTTTGCAT
CAAGGATAACGAGGTGTGGAATGCCCCTGACCTCAAACCTCCCATCAAGACCTTTACGGCCTTCAGAGTCAGAGAAAGGGACTGCCAGCCACGGCATCTT
TGCGAAGTAGGCGTTGAATGCCTCCTCATCCTGATCGCCTGAAACGAAAACCACCTCAAAGCTCTTGCCATGTGAGGCAAGTTCTTTGTATGCTTCAATA
AGCTTTGGCGTGAACCGCCTGCATGGTGGGCACCATGAGGCCGAGAAGTAGAGGGCCACAACGCCTCCCTCAATGCTGCTGATCTTCACCTGAAGGACGA
CAAAAGAGGACAGGTGCAGAGCACTTCAGGTTCAGCTACTACAGACTAGTCCGTGTAAACAAGTTGTTCTCATCCAAATCATGTAACTGTATCTGTTGTT
TGCTCTTTTTTTCAGAAATTTACAGAATATGATGCACACTGCTAATGATTTAATAACCTTCTAATATATGCATGAAGGTTAAAAAGAGGTAGCCTGTTTT
CATCCACTTAGGAGGTAACCTTTCTCATATGCATGTACGGGGAGTTATGGTAGCGAGATTGCTAACTATCAGTCACAGGACAAAGACAGATTGAACTATA
CTATTTCTGGAAGACAGATCATTTACTTATGCACCAAGTATTATGTATCCAGGAAATGCATGCTGCTCCCTCCATCCCAAAATGTAAGGTGCATTTCAAT
TCATTAAGAAAAAAGGCTTCAACCAGAAAACTGCTCTCCAGATATGTGGTTTACATGACGCAAAATTGATGCCACTAGACTTGTATTACAAGTTACCTAG
TACTTACAATTGCAATTTTACATCACGTAAATAAACCACAAAAGACATATTAAT