Detailed information on CNT3013167


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 1e-124

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30656512Zea maysTriticum dicoccoides24.4535.1394.71189forward
CNT30450174Zea maysSaccharum spontaneum70.8966.5997.45548forward
CNT30132048Zea maysLolium perenne73.3560.5185.89567forward
CNT30370632Zea maysOryza glumipatula43.9844.1690.88340forward
CNT30496156Zea maysDigitaria exilis39.9733.392.56309forward
CNT30556448Zea maysPanicum hallii58.3478.8594.46451forward

Expression of CNT3013167

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MEWKSKTSPVRSFWESTRIFAFVHGTDHDRNE*

>peptide 2 (36 aa)
MQPSAPSIAHRPWITSSALFRANASGSADSPAVSQP*

>peptide 3 (96 aa)
YMDANQLTTAKTSRHNYIYAEAEYTWNGRAKLVQFVPSGRAQEYLHSFMVQITTETSSVQHNVLARRGPVASLRPWRCWRRGRRGGRAGSRGAPCR*

>peptide 4 (58 aa)
MAWTKKPNMENMARRPFLISLTLSSAKVTGSSARPSGMTWKPSTARMLCACTRLGLPR*

Sequence

>CNT3013167
TATATGGACGCAAATCAGTTAACAACTGCAAAAACCAGTAGACACAACTACATATATGCTGAAGCAGAGTATACATGGAATGGAAGAGCAAAACTAGTCC
AGTTCGTTCCTTCTGGGAGAGCACAAGAATATTTGCATTCGTTCATGGTACAGATCACGACAGAAACGAGTAGTGTACAACACAATGTCCTGGCACGCCG
CGGCCCGGTAGCTAGCTTAAGACCCTGGCGTTGTTGGCGACGGGGTCGTCGAGGTGGTCGAGCAGGTTCTCGAGGGGCCCCTTGCCGGTGACGATGGCCT
GGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTGACCTTGAGCTCGGCGAAGGTGACGGGGTCGTCGGCGAGGCCCAG
CGGGATGACCTGGAAGCCGAGCACGGCCAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCCAGGTAGTCCAGCCCGCCCTCCGAGAAGATCTGCGCG
CCGGCCTTGAACCACACGGGCTCCTTGAAGTCCACGCGCACCCACTTCTCCAGCACCTCCGGGGTGATGCAGCCCAGCGCACCCAGCATCGCCCACCGCC
CGTGGATCACCTCCAGCGCCCTGTTCCGCGCGAACGCCTCCGGGTCCGCGGACAGCCCGGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTCAG
GTACGAGGGCGTCTGGGCGGAGAAGGGGCCCAGGTACTTGACGCGGTCCGGGCCGTACCACAGGTCGTTGCCC