Detailed information on CNT30131654


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6EW21|PETD_NYMAL, E-value = 3e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30407229Lolium perenneBeta vulgaris57.8249.7182.94170forward
CNT30632102Lolium perenneVigna unguiculata86.3938.3786.61254forward
CNT30201894Lolium perennePisum sativum89.814.8284.09264forward
CNT30504292Lolium perenneNicotiana attenuata88.114.5285.33259forward
CNT3090242Lolium perenneSolanum tuberosum54.0813.687.42159forward
CNT30193370Lolium perenneSecale cereale86.3915.7396.46254forward
CNT3085551Lolium perenneVigna radiata47.6261.486.43140forward
CNT30556068Lolium perenneOryza glaberrima54.7621.9394.41161forward
CNT30435040Lolium perenneAegilops tauschii97.9632.0495.49288forward
CNT30662532Lolium perenneTriticum dicoccoides59.5225.496.57175forward
CNT30309624Lolium perenneCamelina sativa56.839.5782.63167forward
CNT30230699Lolium perenneAnanas comosus30.2715.2492.1389forward
CNT30655369Lolium perenneRosa chinensis52.725.3784.52155forward
CNT30361296Lolium perenneSorghum bicolor27.8910.7889.0282forward
CNT30622073Lolium perenneCajanus cajan56.841.6586.23167forward
CNT30419844Lolium perennePapaver somniferum89.4644.0586.69263forward
CNT3057915Lolium perenneAmborella trichopoda21.4326.1488.8963reverse complement
CNT3025179Lolium perennePopulus trichocarpa26.539.7592.3178forward
CNT30104480Lolium perenneOryza rufipogon31.6318.3496.7793forward
CNT30557534Lolium perennePanicum hallii58.528.3494.19172forward

Expression of CNT30131654

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MGNVAPIPNQRATAVPIKKTVVATGRRKGFWNLLTFSRKGTVNKPVGTETIKRTPNYLLGTVRSI*

Sequence

>CNT30131654
TACACTACGGTTGAATAAATCAAAAAATACCTAAAAAAGGCCTAAAGTTAAAGATTTATCAATGGGTAATGTTGCTCCAATACCCAACCAAAGAGCTACT
GCAGTACCAATTAAAAAAACGGTCGTAGCTACTGGGCGGCGAAAGGGATTTTGGAATTTATTGACATTCTCTAGAAAGGGTACTGTCAATAAGCCTGTTG
GCACAGAAACCATTAAGAGAACGCCCAATTACTTATTGGGTACCGTACGGAGTATTTGAAACACGGGAAAGAAGTACCACTCAGGTAATATTTC