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Detailed information on CNT30131632


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691492Lolium perenneOryza sativa71.6920.6984.08157forward
CNT30676186Lolium perenneSetaria viridis98.6347.8993.06216forward
CNT30519732Lolium perenneSetaria italica77.1758.8991.72169forward
CNT30517210Lolium perenneJuglans regia21.927.4793.7548forward
CNT30297784Lolium perenneTriticum aestivum95.8923.9785.71210forward
CNT30590202Lolium perenneMusa acuminata93.1522.5784.8204forward
CNT3084566Lolium perenneVigna radiata21.467.9891.4947forward
CNT30658930Lolium perenneTriticum dicoccoides23.7421.7698.0852forward
CNT3079298Lolium perenneBrassica juncea35.1618.1284.4277forward
CNT30653715Lolium perenneRosa chinensis41.115.4483.3390forward
CNT30129030Lolium perenneCorymbia citriodora217.895.6546forward
CNT30681640Lolium perenneTriticum urartu83.5615.692.35183forward
CNT30365858Lolium perenneSorghum bicolor77.1746.6991.72169forward
CNT30595794Lolium perenneOryza meridionalis77.1777.1789.94169forward
CNT30325169Lolium perenneAsparagus officinalis77.1763.7784.02169forward
CNT30331328Lolium perenneDioscorea rotundata26.4811.3189.6658forward
CNT30116468Lolium perenneOryza nivara71.2321.9793.59156forward
CNT30603734Lolium perenneOryza punctata71.6911.9687.26157forward
CNT3050369Lolium perenneCucumis sativus78.5438.1480.81172forward

Expression of CNT30131632

Peptides detected in this lncRNA

>peptide 1 (39 aa)
RTPPWSATASWPGTARRSCRRRTRRCPGCRRRRTWTGSC*

>peptide 2 (72 aa)
VEHRPGQRQLPGQEQPEDHAAEGPGDALDADGGALGRGVVDAHDGEDGHVEEEEGGHELGDARAVEGPGLELA

>peptide 3 (31 aa)
MPPKDQAMPWMPTEAHLDGELLTPMTVRMVT*

Sequence

>CNT30131632
GTAGAACACCGCCCTGGTCAGCGACAGCTTCCTGGCCAGGAACAGCCCGAAGATCATGCCGCCGAAGGACCAGGCGATGCCCTGGATGCCGACGGAGGCG
CACTTGGACGGGGAGTTGTTGACGCCCATGACGGTGAGGATGGTCACGTAGAGGAAGAGGAAGGTGGCCATGAACTCGGCGATGCCCGCGCGGTAGAAGG
ACCAGGACTTGAGCTCGCC