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Detailed information on CNT30131528


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZI2|UXS2_ARATH, E-value = 4e-89

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530404Lolium perenneEucalyptus grandis67.988.1784.35313forward
CNT30700549Lolium perenneQuercus lobata54.6663.882.94252forward
CNT30375121Lolium perenneArabidopsis thaliana20.611383.1695forward
CNT30499549Lolium perenneCoffea canephora53.850.6180.65248forward
CNT30277485Lolium perenneChenopodium quinoa36.4419.781.55168forward
CNT3020608Lolium perenneCitrullus lanatus33.6235.1580.65155forward
CNT30729539Lolium perenneCorchorus capsularis39.2626.9382.87181forward
CNT3068683Lolium perenneQuercus suber65.0860.9882300forward
CNT30524728Lolium perennePhaseolus vulgaris55.7547.5980.93257forward
CNT30486152Lolium perenneOlea europaea26.4613.4884.43122forward
CNT30177095Lolium perenneSecale cereale42.081496.39194forward
CNT30289293Lolium perenneTriticum aestivum46.6470.7284.19215forward
CNT30223417Lolium perenneHordeum vulgare44.6990.7587.38206forward
CNT3084565Lolium perenneVigna radiata55.9715.2779.84258forward
CNT30539234Lolium perenneBrassica napus65.2932.981.73301forward
CNT30261302Lolium perenneBrassica rapa65.2958.2282.06301forward
CNT30457070Lolium perenneSaccharum spontaneum56.438.1889.62260forward
CNT30231964Lolium perenneAnanas comosus40.3515.2586.02186forward
CNT30653881Lolium perenneRosa chinensis55.123.7885.04254forward
CNT30718631Lolium perenneMalus domestica golden62.0449.8384.62286forward
CNT30679019Lolium perenneTriticum urartu20.1742.2790.3293forward
CNT30339698Lolium perenneEragrostis tef71.3726.6492.71329forward
CNT30477892Lolium perenneArabidopsis halleri35.5715.3383.54164forward
CNT30359656Lolium perenneLactuca sativa47.2912.981.65218forward
CNT30570592Lolium perenneVitis vinifera52.0674.385.83240forward
CNT30645151Lolium perenneCannabis sativa38.3918.5783.05177forward
CNT3055709Lolium perenneAmborella trichopoda45.9932.4281.6212forward
CNT30105598Lolium perenneOryza longistaminata68.7646.0188.96317forward
CNT30574680Lolium perenneOryza barthii68.7634.6189.27317forward
CNT30580197Lolium perenneEchinochloa crusgalli68.7638.4787.7317forward
CNT30115589Lolium perenneOryza nivara68.7622.2189.27317forward
CNT30604168Lolium perenneOryza punctata58.7998.1995.2271forward
CNT30550386Lolium perenneOryza brachyantha58.3597.8288.48269forward
CNT30337932Lolium perenneCynara cardunculus54.6630.7382.54252forward
CNT30726386Lolium perenneLupinus angustifolius46.8524.0379.17216forward
CNT3050773Lolium perenneCucumis sativus34.2728.1181.01158forward

Expression of CNT30131528

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MGSTTSWRIISKFGLPKWCMTFSLRPVKRRSTRWLPTKPAPPVTRTRRPLRLRPRGTLPPTKWRAGLRAAGSTEKR

>peptide 2 (62 aa)
TNGVDIAPVGLHLRVLEGITIDLTGAGEEEPGSDPLCQSKHVECTNHIGYDCLDGVVLVVYG*

>peptide 3 (34 aa)
MRGMRGGRSGRPRGGWARRRRGGSSRSLGCRSGA*

Sequence

>CNT30131528
ACCAATGGGGTTGACATTGCCCCAGTAGGTCTCCACCTGAGGGTGCTGGAGGGGATCACCATAGACCTCACTGGTGCTGGTGAGGAGGAACCTGGCTCCG
ATCCTCTTTGCCAATCCAAGCATGTTGAGTGTACCAACCACATTGGATATGATTGTCTTGACGGGGTTGTACTTGTAGTGTACGGGTGATGCGGGGCATG
CGAGGTGGTAGATCTGGTCGACCTCGAGGAGGATGGGCTCGACGACGTCGTGGCGGATCATCTCGAAGTTTGGGTTGCCGAAGTGGTGCATGACGTTCTC
CTTGCGGCCCGTGAAGAGGCGGTCGACGAGGTGGCTGCCGACGAAGCCGGCGCCGCCGGTGACGAGGACGCGGAGGCCCTTGCGCTTGAGGCCCAGGGGC
ACCTTGCCGCCCACGAAGTGGCGCGCGGGGTTGCGCGCCGCGGGGTCGACGGAGAAGCGGG