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Detailed information on CNT30131453


BLAST search results

BLAST vs Swiss-Prot:
sp|F1B281|EBIII_PETHY, E-value = 1e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695504Lolium perenneOryza sativa52.5335.8892.89197forward
CNT30518802Lolium perenneJuglans regia31.230.3982.91117forward
CNT30540820Lolium perenneBrassica napus2418.0486.6790forward
CNT30229287Lolium perenneAnanas comosus23.4730.7782.9588forward
CNT30218110Lolium perenneKalanchoe fedtschenkoi27.223.6784.31102forward
CNT30340933Lolium perenneEragrostis tef31.216.0789.74117forward
CNT30367418Lolium perenneSorghum bicolor38.6721.7488.97145forward
CNT30596691Lolium perenneOryza meridionalis71.223.391.76267forward
CNT30106800Lolium perenneOryza longistaminata24.87.6682.893forward
CNT30577574Lolium perenneOryza barthii71.227.3892.13267forward
CNT30117389Lolium perenneOryza nivara52.5331.4293.91197forward
CNT30604447Lolium perenneOryza punctata70.9321.390.6266forward

Expression of CNT30131453

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MRRWSSSLVQAPLLVCSFSQHGDLPMPFRPELIKLPLSQQGGGRACKSRAEAARSL

>peptide 2 (34 aa)
MDTTTYLLPRSPCRRMMSSSSSSVKLPRLRSGRR*

Sequence

>CNT30131453
AGATGGACACGACGACTTACTTGTTGCCGAGGAGTCCGTGTAGGCGGATGATGAGCTCGTCCTCGTCGTCGGTGAAGTTGCCGCGCTTGAGGTCGGGGCG
GAGGTAGTTCATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGCAGGCCCGCCGACTTGGGCAACGAGCGCCAGCAGCCCTCGCCGTTGGCCCGGATG
TAGGCGATGAGGCGCTGGTCCTCCTCCTTGGTCCAGGCGCCCTTGTTGGTGTGCTCCTTCTCGCAGCACGGTGACCTCCCCATGCCGTTCAGACCGGAGC
TAATCAAACTTCCTCTCTCGCAGCAGGGCGGCGGGCGGGCATGCAAGAGCAGAGCAGAGGCAGCTAGGTCGCTCC