Detailed information on CNT30130961


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521273Lolium perenneSetaria italica25.6223.8590.3262forward
CNT30285276Lolium perenneTriticum aestivum25.6222.7995.1662forward
CNT30454559Lolium perenneSaccharum spontaneum26.8629.4186.1565forward
CNT304607Lolium perenneZea mays26.4523.2785.9464forward
CNT30363999Lolium perenneSorghum bicolor26.4522.4687.564forward

Expression of CNT30130961

Peptides detected in this lncRNA

>peptide 1 (79 aa)
PARETFSLLNTAVSKSSEGMAAPTLAGAATMATEVAAERVAAAAARVLGWEKASVEAAEVVGAAIASLWGCQGLLCNGGG

>peptide 2 (44 aa)
GEGDLLLVEHRGVEVERGHGGPHLGRGGDHGDGGGGGEGGGGGG*

Sequence

>CNT30130961
CCGGCGAGGGAGACCTTCTCCTTGTTGAACACCGCGGTGTCGAAGTCGAGCGAGGGCATGGCGGCCCCCACCTTGGCCGGGGCGGCGACCATGGCGACGG
AGGTGGCGGCGGAGAGGGTGGCGGCGGCGGCGGCTAGGGTTTTGGGGTGGGAGAAGGCGAGCGTGGAGGCCGCGGAGGTGGTGGGCGCCGCCATTGCGTC
TCTCTGGGGGTGCCAAGGGCTGCTCTGCAACGGCGGTGGTTG