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Detailed information on CNT30130278


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 2e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30435258Lolium perenneAegilops tauschii32.0498.9492.17281forward
CNT30240454Lolium perenneAvena sativa25.8864.4996.04227forward
CNT30656050Lolium perenneTriticum dicoccoides32.1645.9392.2282forward
CNT3010986Lolium perenneZea mays8.2122.2991.6772forward
CNT30679870Lolium perenneTriticum urartu32.1639.2292.2282forward
CNT30720193Lolium perenneTriticum spelta32.0451.4792.17281forward
CNT30368187Lolium perenneSorghum bicolor7.8728.1692.7569forward
CNT30582663Lolium perenneEchinochloa crusgalli7.8725.1892.7569forward

Expression of CNT30130278

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LYHVYTRSHHMHWTIKIITCINIVQQHSN*

>peptide 2 (66 aa)
MERAEEGRTASLRPEMELPERPFTATGWTATRDAIAASCTVLSSSEDDDAVAGRCTDVVRWTLLRI*

Sequence

>CNT30130278
AATTGTACCATGTATACACACGGTCACATCACATGCACTGGACGATTAAAATCATCACCTGTATAAACATAGTACAACAGCACAGTAATTGAACATCAAA
TGGTCCAGTGGTAGAGTACTATGCATCACGCACGCAGCTAGCATCGTTTCAATTACTGATACGCGGAGTACAGGAATCAAGTATCAACATTACACAAAGA
TAGAAGTGGGATCAAGATCCATGGTACAAAGAGGAGGCAAGGGAAAGGAGAGAGCTTGATTGGAGCTTAGATCTTGCCGCGTGGGCCGGGGACGGGGGGC
AGCTGGGGCCCCTTCTTGATGGGGAGCAGGTCCGGCGAGGCGCTGGCGGAGACGTAGGCGAGCAGCGAGCCGCCGCCGAGGAGCAGGAACTTGAGCAGCA
GGCCGCGCTTGGTGAAGGGCGCGGCGAAGGTGTTGAAGAACTTGCTCTGCAGGCCGTTGTAGGGCGACGGCGCGTCGGAGCCGTACAGGTCGAAGTACAC
GCTCTTCTCGCCGTACTTGGCCACCACCGCCGCGCCCCGAGCCCTGCACCATGGACGCAGAGTTCAGTTAGCTGATCACACACACGTAATGCAGTGATAG
AAACTCGTGTCTCGTACCTGCGGATGGAGCGGGCGGAGGAGGGCCGGACGGCGAGCTTGCGGCCGGAGATGGAGCTGCCGGAGAGGCCCTTCACGGCGAC
CGGCTGGACGGCGACGAGGGACGCCATTGCTGCGAGCTGTACAGTCCTTTCTTCTTCTGAAGACGATGATGCTGTGGCGGGTAGGTGCACAGACGTAGTT
CGGTGGACGCTGTTAAGGATTTGAAATGGACGCTCGGCCGTCGATCAGGTTTGTGTGGGAGGGGCTGCGCGCGGCCG