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Detailed information on CNT30130271


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103007Lolium perenneOryza rufipogon26.125.6386.0293reverse complement
CNT30117531Lolium perenneOryza nivara26.128.886.0293reverse complement

Expression of CNT30130271

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSVSLHRFTRTSWSSFPAAFAVPYPGTGSDRSRFFTLCRGVLLYP*

>peptide 2 (66 aa)
MQVFITISSKGCFYSEELCPSAFTGLLELHGAPFRPRSQFHIPEQGVTGHDSLHSAEVCCFTHKRS*

Sequence

>CNT30130271
GCAGGGGATTTAAGAGTGGGATGAGTACGAGCGTACTCAACAAGTTCATTATAGGAAAGAGGTGTTTAATGCACTAGCTACGACATTAGACCAGAAAGTC
TAATACCAATGCAAGTTTTCATAACCATTTCTTCAAAAGGTTGCTTTTATTCAGAAGAACTATGTCCGTCAGCCTTCACCGGTTTACTAGAACTTCATGG
AGCTCCTTTCCGGCCGCGTTCGCAGTTCCATATCCCGGAACAGGGAGTGACAGGTCACGATTCTTTACACTCTGCAGAGGTGTGTTGCTTTACCCATAAG
AGATCTTAACCTTGGTGCCAACCGGGCAGCTTTCCCGTCCACACTTCCTTTGGTGT