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Detailed information on CNT30129613


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 5e-76

BLAST vs NONCODE:
NONBNAT007398, E-value = 4e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696173Corymbia citriodoraOryza sativa48.7743.8689.92357forward
CNT30187536Corymbia citriodoraSecale cereale57.148.0590.67418forward
CNT30301046Corymbia citriodoraTriticum aestivum57.150.5490.19418forward
CNT30393967Corymbia citriodoraTriticum turgidum50.6861.8391.91371forward
CNT30552306Corymbia citriodoraOryza glaberrima45.2251.2493.35331forward
CNT30251938Corymbia citriodoraAvena sativa58.253.8690.14426forward
CNT30665949Corymbia citriodoraTriticum dicoccoides57.149.1891.15418forward
CNT30456255Corymbia citriodoraSaccharum spontaneum59.9753.6788.38439forward
CNT30685781Corymbia citriodoraTriticum urartu44.9537.7390.27329forward
CNT30369202Corymbia citriodoraOryza glumipatula48.6339.9692.98356forward
CNT30108138Corymbia citriodoraOryza longistaminata57.3851.8590.48420forward
CNT30103236Corymbia citriodoraOryza rufipogon57.3842.5590.48420forward
CNT30574663Corymbia citriodoraOryza barthii57.5151.1591.69421forward
CNT30115779Corymbia citriodoraOryza nivara46.7265.1493.27342forward
CNT30603587Corymbia citriodoraOryza punctata46.5867.1392.67341forward

Expression of CNT30129613

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MAILPFPKSSGVDGESFTALPASDGEERAMVEAAIFASDTRLTSASVQTRD

>peptide 2 (37 aa)
MRKQQESSQQKDPLVVRHKTPLTFRERSWWRRPRRCC*

>peptide 3 (74 aa)
MACTKNPNMENMARRPFLISFTLSSANASGSSARSSGKTQPRAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 4 (69 aa)
MPPGRRRGAPGRRNRGPRAWPTGSGSPRARGSWRRSRGRPRARRCPTRSHRGTRRSGRTGARRRRGRGT*

>peptide 5 (38 aa)
ERITIFSALHKVNFAVNLHKDEETTRIVATKRPPRRPT*

Sequence

>CNT30129613
CGAAAGGATCACAATATTCTCAGCTCTCCATAAAGTAAATTTTGCAGTGAATTTACACAAAGATGAGGAAACAACAAGAATCGTCGCAACAAAAAGACCC
CCTCGTCGTCCGACATAAGACACCTCTCACTTTCCGGGAACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTAACGGGGTCGGCGAGGTGGTCGGCGA
GGTTCTCCAGCGGCCCCTTTCCGGTCACGATGGCCTGCACGAAGAACCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAG
CTCCGCGAATGCCTCCGGGTCGTCGGCGAGGAGCTCCGGGAAGACGCAACCGAGGGCCCCGAGCATGGCCCACCGGCAGTGGATCACCTCGAGCTCGCGG
TTCTTGGCGAAGGTCTCGGGGTCGGCCGAGAGCCCGGCGGTGTCCCACCCGTAGTCACCGGGGAACTCGCCGGTCAGGTAGGACGGGGGCTCGCCGGAGA
AGGGGCCGAGGTACTTGACGCGGTCGGGTCCGTACCAGGGGCTCCCGGAGGAGACGGGCTTGGTGACGGTCTTCCTCATGGCGATCCTCCCGTTCCCGAA
GAGCTCGGGGGTCGACGGAGAGAGCTTCACGGCCTTGCCGGCGAGCGACGGCGAGGAGAGAGCCATGGTAGAGGCTGCCATTTTCGCTTCCGACACAAGA
CTCACTTCGGCTTCTGTTCAAACGAGAGACTG