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Detailed information on CNT30129276


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 1e-37

BLAST vs NONCODE:
NONATHT003369, E-value = 3e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677979Corymbia citriodoraSetaria viridis43.5419.1887.36182forward
CNT30522084Corymbia citriodoraSetaria italica24.1633.1189.11101forward
CNT30317272Corymbia citriodoraCorylus avellana40.9143.9687.13171forward
CNT30372848Corymbia citriodoraArabidopsis thaliana21.2914.8387.6489forward
CNT30729860Corymbia citriodoraCorchorus capsularis42.8219.3589.39179forward
CNT30709004Corymbia citriodoraGlycine max24.1637.5585.15101forward
CNT30300679Corymbia citriodoraTriticum aestivum42.1181.1186.93176forward
CNT30383102Corymbia citriodoraTriticum turgidum30.8644.0389.15129forward
CNT30562914Corymbia citriodoraActinidia chinensis42.8258.8885.47179forward
CNT30555317Corymbia citriodoraOryza glaberrima32.0646.8587.31134forward
CNT3079816Corymbia citriodoraBrassica juncea13.420.3691.0756forward
CNT30611949Corymbia citriodoraArabis alpina29.1935.2685.25122forward
CNT30446069Corymbia citriodoraSaccharum spontaneum27.995.1683.76117forward
CNT30135921Corymbia citriodoraLolium perenne43.5448.490.11182forward
CNT3065Corymbia citriodoraZea mays43.5474.5989.01182forward
CNT30609153Corymbia citriodoraGossypium raimondii42.1143.4687.5176forward
CNT30648424Corymbia citriodoraRosa chinensis40.4352.6586.98169forward
CNT30716299Corymbia citriodoraMalus domestica golden44.530.6488.71186forward
CNT30719750Corymbia citriodoraTriticum spelta43.5476.4787.36182forward
CNT30361871Corymbia citriodoraSorghum bicolor27.996.8582.91117forward
CNT30619808Corymbia citriodoraCajanus cajan20.3314.2990.5985forward
CNT30359416Corymbia citriodoraLactuca sativa44.0225.7387.5184forward
CNT3024647Corymbia citriodoraPopulus trichocarpa30.6224.7189.06128forward
CNT30331462Corymbia citriodoraDioscorea rotundata43.5435.4182.42182forward
CNT30579614Corymbia citriodoraEchinochloa crusgalli43.7846.3390.71183forward
CNT30496537Corymbia citriodoraDigitaria exilis19.1435.486.2580forward

Expression of CNT30129276

Peptides detected in this lncRNA

>peptide 1 (81 aa)
CVVATSKVVGSIFLAADELLRVEELAVGSGPDLVDDGGLEIYKDSARDVLPGTSLAEEGVEGSTAPSRRCLLGFQPGRCEC*

>peptide 2 (65 aa)
MTVGSRSTKTARGTCFPAPVSLKKVLKAVQLPAGVAYLDSSLADVNADALPHFHRKRRGRLCRKR*

>peptide 3 (42 aa)
MLMHSLIFTGRDAEGFAGRGDRRNGGDGDRRRRRRRRGRRRL*

Sequence

>CNT30129276
TTGTGTAGTGGCCACGAGCAAAGTTGTTGGCAGCATCTTCCTTGCCGCTGATGAGCTGCTCAGGGTGGAAGAGCTGGCGGTAGGTTCCGGTCCTGACCTC
GTCGATGACGGTGGGCTCGAGATCTACAAAGACAGCGCGAGGGACGTGCTTCCCGGCACCAGTCTCGCTGAAGAAGGTGTTGAAGGCAGTACAGCTCCCA
GCAGGCGTTGCCTACTTGGATTCCAGCCTGGCCGATGTGAATGCTGATGCACTCCCTCATTTTCACCGGAAGAGACGCGGAAGGCTTTGCCGGAAGAGGT
GATCGGAGAAACGGCGGCGACGGCGACCGGAGGAGGAGGAGGAGGAGGAGGGGTCGAAGGCGTTTATGAAGACGCCTTCTTTAGAGAAAATCTCTCTATC
GATCTGCGAAAATGAAAA