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Detailed information on CNT30129112


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42699|METE_CATRO, E-value = 4e-66

BLAST vs NONCODE:
NONBRAT005682, E-value = 8e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404182Corymbia citriodoraBeta vulgaris55.6539.7382.13207forward
CNT30563287Corymbia citriodoraActinidia chinensis41.1332.9784.31153forward
CNT30555770Corymbia citriodoraOryza glaberrima23.3923.0883.9187forward
CNT30212158Corymbia citriodoraHelianthus annuus27.1525.9684.16101forward
CNT30478263Corymbia citriodoraArabidopsis halleri19.3520.8188.8972forward
CNT30105511Corymbia citriodoraOryza longistaminata20.16308475forward
CNT30578457Corymbia citriodoraOryza barthii23.3915.3483.9187forward
CNT30604899Corymbia citriodoraOryza punctata23.1236.9183.7286forward

Expression of CNT30129112

Peptides detected in this lncRNA

>peptide 1 (71 aa)
SRAWRVLSDPARSLAQMFLPSTTPAKRYLPVGNPPLIKSRVCAPRTKSNPNPETPFKEVRTLYASAGTSAK*

Sequence

>CNT30129112
CTCGAGAGCATGGAGGGTGCTGAGTGATCCAGCAAGATCATTGGCCCAGATGTTCCTCCCATCAACAACTCCAGCAAAGAGATACTTGCCTGTGGGGAAC
CCACCCTTGATTAAATCAAGGGTCTGTGCTCCACGGACCAAATCAAATCCAAATCCAGAGACACCCTTCAAGGAAGTAAGAACTTTATATGCCTCAGCAG
GAACATCAGCAAAATAGGTTTGGACGAGAACATTCACGCCAGAAAGACACGATTCAAGTTCCGAGTACGCATTAGTGAATGCTTGCAGTTTGCGAGGATC
AAGATCCAACACAAGGGTGGGCTCATCAAACTGAATCCATGAAGCGCCGGCTGCCTTGAGTTCGGACACGAC