Detailed information on CNT30129105


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42699|METE_CATRO, E-value = 6e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672574Corymbia citriodoraSetaria viridis23.7211.3292.3165forward
CNT30491477Corymbia citriodoraOlea europaea30.2926.684.3483forward

Expression of CNT30129105

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MPQQEHQQNRFGREHSRQKDMIQAPSMLQ*

>peptide 2 (39 aa)
MDQIKSKSRDALQGSKNFICLSRNISKIGLDENIHARKT*

>peptide 3 (36 aa)
LIKSRVLVPWTKSNPNPETPFKEVRTLYASAGTSAK*

Sequence

>CNT30129105
CTTGATTAAATCAAGGGTGTTGGTTCCATGGACCAAATCAAATCCAAATCCAGAGACGCCCTTCAAGGAAGTAAGAACTTTATATGCCTCAGCAGGAACA
TCAGCAAAATAGGTTTGGACGAGAACATTCACGCCAGAAAGACATGATTCAAGCTCCGAGTATGCTTCAGTGAATGCTTGCAGTTTGTGAGAATCAAGAT
CCAACACAAGGGTGGGCTCATCAAACTGAATCCATGAAGCACCGGCTGCCTTAAGTTCGGACACGACTTCCCTG