« Back to Corymbia citriodora search


Detailed information on CNT30129081


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XT99|AKR2_ORYSJ, E-value = 6e-46

BLAST vs NONCODE:
NONATHT000730, E-value = 7e-12

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530604Corymbia citriodoraEucalyptus grandis73.4695.9886.91382forward
CNT30316626Corymbia citriodoraCorylus avellana28.4628.9679.73148forward
CNT3070513Corymbia citriodoraQuercus suber31.3523.9480.37163forward
CNT3096605Corymbia citriodoraSolanum tuberosum22.1213.7484.35115forward
CNT30566888Corymbia citriodoraActinidia chinensis2020.8881.73104forward
CNT30543366Corymbia citriodoraBrassica napus2528.780.77130forward
CNT3060034Corymbia citriodoraArabidopsis lyrata25.5836.7481.2133forward
CNT30479816Corymbia citriodoraArabidopsis halleri25.5815.7280.45133forward

Expression of CNT30129081

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLLSYRPPLTLSAEAINSSSAISSGVSFTDRAPMF*

>peptide 2 (38 aa)
EAWYGFNSLPCFSSDLSPVSLLHIYNLLMVNVTCTKGK*

Sequence

>CNT30129081
GGAAGCTTGGTATGGATTCAACTCGCTCCCGTGTTTCTCAAGTGATCTTTCCCCAGTAAGCTTATTACACATCTATAATCTTCTAATGGTGAATGTCACT
TGTACAAAAGGAAAATAGTCCCTGACTGAAGTACAGATTTTATTACAGGATAACAGCCACACAACATAGCATCAAATACTTCAGCAGCAAATGCTCAAAC
TCTGCACATCAGAGATGCAGCGACAGAAGCATACATGTTTTTAAGCAGGTTTCCATGAAGAAAGGGGTGGAGTGTCAGAGTTTTCCCATGTAGACATGCT
GCTATCATACCGGCCACCCTTGACATTGTCTGCAGAAGCAATCAATTCAAGCTCGGCCATCTCTTCCGGTGTAAGCTTCACTGACAGAGCTCCAATGTTC
TGATTGAAATTCTCAATCTTGGTCGTGCCGGGAATTGGGCAGACGTCGTCACCCTGGTGGTGTACCCAAGCAAGGGCTAACTGCGAAGGGGTGCATCCCT
TTCTTTGTGCAATTTCATTC