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Detailed information on CNT30129040


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 1e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3098801Corymbia citriodoraSolanum tuberosum23.3123.6983.7286forward
CNT3085442Corymbia citriodoraVigna radiata40.3820.8181.21149forward
CNT3024212Corymbia citriodoraPopulus trichocarpa20.0511.6786.4974forward

Expression of CNT30129040

Peptides detected in this lncRNA

>peptide 1 (46 aa)
YIFPSTCHFHEQHPKAIDICFIRYTTNVFVEQLRRHISQCSSCSSH*

>peptide 2 (38 aa)
MSKCSICTLPPDVNIQSPSPPQEQSHILSCCRETYHLP*

Sequence

>CNT30129040
TACATTTTTCCTTCTACCTGCCATTTCCATGAGCAACATCCCAAAGCTATAGACATCTGCTTTATAAGATATACCACCAATGTTTTTGTAGAACAACTCA
GGCGCCATATATCCCAATGTTCCTCTTGCAGCAGTCATTGAGACTATGCTATGATCAATGGGATATAGTTTCGCAAGTCCAAAATCAGATAATTTCGGAG
TGAAATTTTTGTCTAAAAGAATATTGTGAGGTTTGATGTCAAAATGTAGTATTTGCACGTTACCCCCCGATGTAAATATTCAATCCCCTTCGCCACCCCA
AGAGCAATCTCATATACTTTCTTGTTGTCGAGAAACTTATCACCTTCCTTAGTGAAAATGTGCTTATCC