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Detailed information on CNT30128695


BLAST search results

BLAST vs Swiss-Prot:
sp|B2LSD2|MUCIN_MUCPR, E-value = 4e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221137Corymbia citriodoraHordeum vulgare16.6726.5489.2956forward
CNT30558531Corymbia citriodoraPanicum hallii14.8820.089250forward

Expression of CNT30128695

Peptides detected in this lncRNA

>peptide 1 (39 aa)
PVACRRGGRRSGRWRASPSPPGAWGRSGCRGRWRGTPRW*

>peptide 2 (54 aa)
MARYSSLVRSANRFIPRVYDRLWALCSSTNRRLSRKISNRRSRSPRRRGRGRRW*

Sequence

>CNT30128695
GCCGGTAGCATGTCGTCGGGGCGGGCGGCGTAGCGGTCGCTGGCGCGCTTCGCCTTCGCCACCCGGCGCCTGGGGTCGCTCCGGGTGCCGAGGTAGATGG
CGCGGTACTCCTCGTTGGTGAGGTCAGCGAACCGGTTCATCCCGAGGGTGTACGACCGGTTGTGGGCGTTGTGCTCATCGACGAACCGGAGGTTGTCGCG
GAAGATCTCGAACCGCCGCTCCCGCTCGCCGAGGCGAAGAGGAAGAGGGCGGCGGTGGTGATGGCCGGGATCGCCATGGAAGAGAAGAACGAAGTAAGAA
GGAAGGAGGAGGAAGAAGAAAGAGTTGGAGAGTGAG