Detailed information on CNT30128643


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380865Corymbia citriodoraManihot esculenta29.0513.5583.1695forward
CNT30160456Corymbia citriodoraPistacia vera30.898.6382.18101forward
CNT30142453Corymbia citriodoraLolium perenne25.9927.4287.0685forward
CNT30163Corymbia citriodoraZea mays30.2847.8381.8299forward
CNT30228849Corymbia citriodoraAnanas comosus24.466.4183.7580forward
CNT3067881Corymbia citriodoraLeersia perrieri24.7721.8986.4281forward
CNT30715436Corymbia citriodoraMalus domestica golden27.5227.6985.5690reverse complement

Expression of CNT30128643

Peptides detected in this lncRNA

>peptide 1 (75 aa)
RRSSGWVEQPATIEAMPPSTNPLTPISKLGRNRRSTRSSSWSWGSCHWRRGGGSGGRRRRRRSEGRRVSETYASG*

>peptide 2 (63 aa)
EKVERVGRATGHDRGYASFDESLDAHLQTRPEQTINQIFKLELGFMSLETRRWEWRPKATEEE*

Sequence

>CNT30128643
TGAGAAGGTCGAGCGGGTGGGTCGAGCAACCGGCCACGATCGAGGCTATGCCTCCTTCGACGAATCCCTTGACGCCCATCTCCAAACTCGGCCGGAACAG
ACGATCAACCAGATCTTCAAGTTGGAGTTGGGGTTCATGTCACTGGAGACGAGGAGGTGGGAGTGGAGGCCGAAGGCGACGGAGGAGGAGTGAGGGACGG
CGGGTCTCTGAGACATATGCCAGCGGATGATCGACGGTGAGGAGGGGAAGGAGGAAAGAGAAGGATGATTGCTTCCGGCGGTGTCGGTGGAGAGATTGGT
TCAGGCGGAGAGGGAATTTATAGGTGG