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Detailed information on CNT30128547


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617122Corymbia citriodoraSesamum indicum5.0332.8887.572forward
CNT30556129Corymbia citriodoraOryza glaberrima10.5534.2485.43151forward
CNT30627895Corymbia citriodoraDaucus carota10.951.3285.9156reverse complement
CNT30726938Corymbia citriodoraLupinus angustifolius7.25087.38103forward

Expression of CNT30128547

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MPNHPQEGLYPCFAFHVSVYKLFASLKLHNRVVVSSVNR*

>peptide 2 (45 aa)
MVRFYLPIHLYIFGTFAWLNCLSINIFLETNRNCSIYFSKQIKKK*

>peptide 3 (56 aa)
QSVCNSISFTRTPRPRSDLEIYLLVVIDEKSDLVFKSIEQCSIAHLEKYLLLLSLD*

>peptide 4 (29 aa)
MRPLSSRAEESASSYRSNFGEEKKTLLSK*

>peptide 5 (33 aa)
MVELSVNKYISGNQPELFNIFLETNKKEMKDQA*

Sequence

>CNT30128547
CAATCAGTCTGCAATTCTATTAGCTTCACGAGGACACCACGACCAAGGTCAGATCTGGAAATTTACCTCTTAGTAGTCATTGATGAGAAATCTGACTTGG
TCTTCAAGAGCATTGAACAGTGTTCGATTGCCCACTTGGAGAAGTACCTTCTTCTCCTTTCGTTAGATTAACATCTCCGAAGGGTTCTCCGTTTCCATTG
CTGAATTACAACGAAGCTTTCCAGAGCACCCATCAGCTTTCCTGGGCACTGCCGCAAAAGCTCCAGTTTGGCTTCCTTCTTTCCTTCTAGATCTGCCAAA
GCAACGCAGGTTGAGCAATGCCGAACCATCCCCAAGAAGGTCTGTACCCCTGTTTTGCATTCCATGTATCTGTTTACAAACTATTTGCTTCTTTAAAACT
CCATAACAGAGTAGTTGTAAGTTCAGTCAACCGCTAAACTTGTTTTGCAAGAAAGGCCAGGTTGAATTTGTTAAGCTCTCAAAAGCCTAAACCTCCTTCG
TGCTTCTTTCTCCAATTGTCTGCGGCCTACTGTGCAATAGAGTGATTCCAAATAATTCTGTTGACAAAGGGAAAAATGTGCAAGTCCTCAATAAACGGAC
TCAGTCGGCAAAGGTCGAATAAGGAGTGATGGAGACAAGAATTTGCTGAGTGTTGGAGTTCTAAGCCGACAAATCTACGAAATTGACAGGAAAACTAGTT
TTAGCGGCGGCAATATATAGGTGGAAATGACCAAGTCGTGGAGTAGAATGTTGACAGGGGAAGATCAATCCAAGCAGTAAAAAGACCATGATTGATGTAA
CTATCGACGGAATGAAATTGAAATAACCATGTAAAAGTTGGAGATGATGATTTCGAAATCAAACATCAGAGGGACATTTGTAAAGGAGTAAACTCAATGC
GACCGTTGAGTAGTAGAGCCGAGGAGTCCGCAAGCAGCTATAGAAGTAATTTTGGAGAAGAGAAGAAGACATTACTGTCGAAGTAGTGGAGAAAGCACAA
CCGTTGAGTAGTGGAGTGCATTATTGCTGAGTAACCATTTGTGGTTACTGCATTGTAGGAGCCACGTATAACATGTTTGATTTTCTTTGACCGTTAATAA
ATGTAGATAGTAGGTATAAATGCTTGAATTGTAGTTTGTAGAAGGGACCGTCTATCAATCAAAGAACATCAATGGTTCGATTTTATCTTCCTATTCATCT
TTACATTTTTGGTACTTTTGCATGGTTGAACTGTCTGTCAATAAATATATTTCTGGAAACCAACCGGAATTGTTCAATATATTTCTCGAAACAAATAAAA
AAGAAATGAAAGATCAAGCATAAATCATGGATCAACCAAGTCTTCTTGGAGGCTTGCTCAAGAGTAAGAAAGAGGAATTTCATGTAAGTACCATGGAATA
AGGTTTGATCCTATTCATGGGTATTCCATAA