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Detailed information on CNT30128249


BLAST search results

BLAST vs Swiss-Prot:
sp|P08894|CHSA_PETHY, E-value = 3e-128

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3087878Corymbia citriodoraVigna radiata25.8811.3280.79177forward
CNT3074040Corymbia citriodoraBrassica juncea17.5427.1583.33120forward
CNT30469647Corymbia citriodoraSaccharum spontaneum21.357386.3146forward
CNT30365392Corymbia citriodoraSorghum bicolor21.3525.1785.62146forward

Expression of CNT30128249

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MSMPLVVQNTRWVILDLGCPHSLMAFTAASLASFGTSTTRMSCRASKDASVNELMLGCCFNMSSVMCRYLFLIMDP

>peptide 2 (87 aa)
MPSGWNDSAMVFSTFLEMRPGTSLRRWMVRPISRTCPAMAPSLLGRRVWDAETISYRGRSTPGMGSDPTMTDEAPSPNRACPTRLSR*

>peptide 3 (34 aa)
MPGIQGRLRERTHARVLFQYVLRHVQVPLLDHGSI

Sequence

>CNT30128249
GGGGCCGCCGGGGTGCACGATGTAGAAGAGCGAGTTCCAGTCCGTGATGCCTAGCGGGTGGAACGACTCGGCCATGGTCTTTTCTACGTTCTTGGAGATG
AGGCCCGGCACGTCCTTGAGGAGGTGGATGGTGAGGCCGATCTCGCGGACGTGCCCGGCGATGGCCCCCTCGCTGTTGGGGAGGAGGGTCTGGGACGCGG
AGACGATCTCGTACAGGGGCCGCTCCACCCCCGGGATGGGGTCCGACCCCACGATGACCGACGAGGCGCCGTCGCCGAACAGGGCCTGCCCCACGAGGTT
GTCCAGGTAGGCCTCGGTGGGCCCGCGGAAGGTACAGACGGTTATCTCGGAGCACACGACCAGGATGCGCGCACCCTTGTTGTTCTCAGCAAGATCCTTG
GCAAGGCGGAGGACGAGGCCGAGGAGCTTGGTGAGCTGGTAGTCGCAGCCCGGCATGTCGATGCCGCTGGTTGTACAGAACACCAGGTGGGTGATCTTGG
ACTTGGGCTGCCCCCACTCCTTGATGGCGTTCACCGCCGCCTCCTTGGCCAGCTTCGGCACCTCCACCACCAGAATGTCATGCCGGGCATCCAAGGACGC
CTCCGTGAACGAACTCATGCTCGGGTGCTGTTTCAATATGTCCTCCGTCATGTGCAGGTACCTCTTCTTGATCATGGATCCATC