« Back to Corymbia citriodora search


Detailed information on CNT30127375


BLAST search results

BLAST vs Swiss-Prot:
sp|P34823|EF1A2_DAUCA, E-value = 2e-95

BLAST vs NONCODE:
NONBNAT001751, E-value = 7e-123

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692292Corymbia citriodoraOryza sativa93.7367.7585.85523forward
CNT30672814Corymbia citriodoraSetaria viridis93.7349.0688.34523forward
CNT30520996Corymbia citriodoraSetaria italica93.7341.9788.34523forward
CNT30639730Corymbia citriodoraNymphaea colorata93.7356.9186.23523forward
CNT30535563Corymbia citriodoraEucalyptus grandis99.6468.1491.73556forward
CNT30316757Corymbia citriodoraCorylus avellana93.1943.4186.35520forward
CNT30546799Corymbia citriodoraIpomoea triloba93.7342.5984.89523forward
CNT30518094Corymbia citriodoraJuglans regia93.0155.4586.13519forward
CNT30377782Corymbia citriodoraArabidopsis thaliana93.7351.7883.94523forward
CNT30618377Corymbia citriodoraSesamum indicum69103.2282.86385forward
CNT30274113Corymbia citriodoraChenopodium quinoa77.0668.9183.49430forward
CNT3021232Corymbia citriodoraCitrullus lanatus93.7342.2584.51523forward
CNT30727585Corymbia citriodoraCorchorus capsularis94.2739.0288.78526forward
CNT30380230Corymbia citriodoraManihot esculenta93.7321.5684.51523forward
CNT30525464Corymbia citriodoraPhaseolus vulgaris56.4555.7585.08315forward
CNT30629525Corymbia citriodoraVigna unguiculata69.359085.01387forward
CNT30194937Corymbia citriodoraPisum sativum59.3233.1386.71331forward
CNT30712097Corymbia citriodoraGlycine max57.1726.7485.89319forward
CNT30160120Corymbia citriodoraPistacia vera94.2742.3285.36526forward
CNT30287202Corymbia citriodoraTriticum aestivum50.3639.0885.05281forward
CNT30224163Corymbia citriodoraHordeum vulgare50.1841.7388.21280forward
CNT30387246Corymbia citriodoraTriticum turgidum97.4947.2682.17544forward
CNT30564256Corymbia citriodoraActinidia chinensis92.2944.2485.63515forward
CNT30590460Corymbia citriodoraMusa acuminata36.252.686.63202forward
CNT3084148Corymbia citriodoraVigna radiata67.3823.0884.04376forward
CNT30541587Corymbia citriodoraBrassica napus93.7344.4785.28523forward
CNT30233993Corymbia citriodoraBrassica oleracea93.7348.784.7523forward
CNT30173274Corymbia citriodoraTrifolium pratense94.2739.1185.55526forward
CNT30146334Corymbia citriodoraMedicago truncatula84.5947.4886.65472forward
CNT30440472Corymbia citriodoraAegilops tauschii52.8749.5886.78295forward
CNT30246955Corymbia citriodoraAvena sativa94.2729.885.93526forward
CNT30665783Corymbia citriodoraTriticum dicoccoides56.2734.4787.58314forward
CNT30310418Corymbia citriodoraCamelina sativa93.7345.0984.13523forward
CNT3059455Corymbia citriodoraArabidopsis lyrata93.7341.0884.13523forward
CNT3077042Corymbia citriodoraBrassica juncea93.7343.4484.7523forward
CNT30614135Corymbia citriodoraArabis alpina93.0133.2783.82519forward
CNT30598511Corymbia citriodoraFraxinus excelsior46.5939.9487.31260forward
CNT30449495Corymbia citriodoraSaccharum spontaneum98.3945.1185.61549forward
CNT3011166Corymbia citriodoraZea mays93.7336.9986.42523forward
CNT30608730Corymbia citriodoraGossypium raimondii79.9374.3385.2446forward
CNT30651330Corymbia citriodoraRosa chinensis42.4753.7488.61237forward
CNT30624959Corymbia citriodoraDaucus carota55.5691.1886.45310forward
CNT30685098Corymbia citriodoraTriticum urartu56.8121.5686.75317forward
CNT30350898Corymbia citriodoraEragrostis tef93.7346.9585.47523forward
CNT30480841Corymbia citriodoraArabidopsis halleri61.1154.9183.28341forward
CNT30368495Corymbia citriodoraSorghum bicolor10054.7686.02558forward
CNT30355521Corymbia citriodoraLactuca sativa90.8653.1484.02507forward
CNT30151899Corymbia citriodoraPrunus persica56.6328.6587.66316forward
CNT30424546Corymbia citriodoraPapaver somniferum93.9144.3785.31524forward
CNT30706337Corymbia citriodoraPrunus avium96.7746.3184.63540forward
CNT3052982Corymbia citriodoraAmborella trichopoda52.8722.5587.8295forward
CNT3024422Corymbia citriodoraPopulus trichocarpa93.7368.5586.04523forward
CNT3037774Corymbia citriodoraCucumis melo56.4540.7585.71315forward
CNT30148140Corymbia citriodoraBrachypodium distachyon55.5681.5888.39310forward
CNT30101006Corymbia citriodoraOryza rufipogon44.835.9286.8250forward
CNT30496874Corymbia citriodoraDigitaria exilis93.7346.6587.38523forward
CNT30594443Corymbia citriodoraEragrostis curvula93.7345.0586.62523forward
CNT30603788Corymbia citriodoraOryza punctata93.7344.485.28523forward
CNT30113122Corymbia citriodoraFicus carica69.5346.7586.6388forward
CNT30724026Corymbia citriodoraLupinus angustifolius94.2736.5384.6526forward
CNT3050294Corymbia citriodoraCucumis sativus69.3563.1385.01387forward

Expression of CNT30127375

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MGLVGIIFTIPASPFFKNLGSFSSSLPDRLSILVISSANLTAM*

>peptide 2 (96 aa)
MMITWAVKLAASLAGSSLELDATKPRLRSLTATFFTLNPTLSPGRASWRASWCISTDLTSVVNPEGPKVTTIPGLMIPVSTRPTGTVPIPPILYTS*

>peptide 3 (70 aa)
MVHLHRLNFSSQPRGTKSDNHTRLNDTGLNTTNRDSSDTTDLVHVLKWETEGLVRWSLGLIKQVQGLQQCW

Sequence

>CNT30127375
CATGGGCTTAGTGGGAATCATCTTCACCATCCCAGCATCACCGTTCTTCAAGAACTTGGGCTCCTTCTCAAGTTCCTTACCTGATCGCCTATCGATCTTG
GTCATCAGCTCAGCAAACTTGACAGCAATGTGACAGGTGTGGCAGTCAAGAACAGGGGCATAACCATTTCCGATTTGCCCAGGGGTGGTTCATGATGATA
ACTTGGGCAGTGAAGTTGGCTGCTTCCTTGGCAGGATCATCCTTAGAGTTGGATGCAACGAAGCCACGCTTGAGATCCTTGACAGCAACATTCTTCACAT
TAAACCCGACATTGTCACCCGGAAGGGCCTCCTGGAGAGCCTCATGGTGCATCTCCACAGACTTAACTTCAGTAGTCAACCCAGAGGGACCAAAAGTGAC
AACCATACCAGGCTTAATGATACCGGTCTCAACACGACCAACAGGGACAGTTCCGATACCACCGATCTTGTACACGTCCTGAAGTGGGAGACGGAGGGGC
TTGTCAGATGGTCTCTTGGGCTCATTAAGCAAGTCCAGGGCCTCCAGCAATGTTGGGC