Detailed information on CNT30127030


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200883Corymbia citriodoraPisum sativum92.0613.5891.88197forward
CNT30194088Corymbia citriodoraSecale cereale10021.8193.46214forward
CNT30397046Corymbia citriodoraTriticum turgidum24.7716.3194.3453reverse complement
CNT30543277Corymbia citriodoraBrassica napus99.0734.6491.51212forward
CNT30212621Corymbia citriodoraHelianthus annuus10012.2694.39214forward
CNT30688279Corymbia citriodoraTriticum urartu10020.2393.46214forward
CNT30481719Corymbia citriodoraChara braunii44.3914.7188.4295forward
CNT30571978Corymbia citriodoraVitis vinifera1004.6493.93214forward

Expression of CNT30127030

Peptides detected in this lncRNA

>peptide 1 (30 aa)
LPKTAIPTFSFSRFKAIPFTPLANSTISPA*

>peptide 2 (45 aa)
YQRQQSPHSHSQDLRLFLSHRWQIQPFHQLESPSIHKHVQSHLQL*

Sequence

>CNT30127030
CTACCAAAGACAGCAATCCCCACATTCTCATTCTCAAGATTTAAGGCTATTCCTTTCACACCGTTGGCAAATTCAACCATTTCACCAGCTTGAATCTCCT
TCAATCCATAAACACGTGCAATCCCATCTCCAACTGTGATCACTCGACCGATCTCATCCACTTGAAAATTCGTGTAAAAGTTGGTAATTCGACTTTCTAA
TAGAGTCGTTAGTT