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Detailed information on CNT30126269


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517641Corymbia citriodoraJuglans regia70.1849.4484.21266forward
CNT30377662Corymbia citriodoraArabidopsis thaliana42.4817.8181.37161forward
CNT30278532Corymbia citriodoraChenopodium quinoa51.7217.8383.67196forward
CNT30629341Corymbia citriodoraVigna unguiculata54.8819.0579.81208forward
CNT3043981Corymbia citriodoraPrunus dulcis44.0647.4480.84167forward
CNT30164689Corymbia citriodoraPistacia vera25.5917.6484.5497forward
CNT30189101Corymbia citriodoraSecale cereale44.0615.8982.04167forward
CNT30397803Corymbia citriodoraTriticum turgidum47.2322.882.12179forward
CNT30561418Corymbia citriodoraActinidia chinensis55.9421.0380.19212forward
CNT30144554Corymbia citriodoraMedicago truncatula46.9720.7980.9178forward
CNT30264134Corymbia citriodoraBrassica rapa26.3911.5382100forward
CNT30140632Corymbia citriodoraLolium perenne38.5271.5781.51146forward
CNT30605054Corymbia citriodoraGossypium raimondii72.348.3281.75274forward
CNT30686469Corymbia citriodoraTriticum urartu29.822083.19113forward
CNT30366134Corymbia citriodoraSorghum bicolor37.4722.583.1142forward
CNT30120413Corymbia citriodoraCitrus clementina62.0129.0580.43235forward
CNT3038556Corymbia citriodoraCucumis melo26.9112.9186.27102forward
CNT30149228Corymbia citriodoraBrachypodium distachyon24.2719.3782.6192forward
CNT30333676Corymbia citriodoraCynara cardunculus22.4316.4787.0685forward
CNT30725707Corymbia citriodoraLupinus angustifolius35.0924.1481.95133forward
CNT3048947Corymbia citriodoraCucumis sativus26.917.2185.29102forward

Expression of CNT30126269

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MAESPSEPVALSSSFSFSFSTSNLGFHAVTLYDSATFSSLAIKILSNKIPSCIVQISIPIAAIGSKSGLSSSK*

>peptide 2 (68 aa)
SKTKIQILKGIKNLHVWLRVHRNQWLYPLPFPSPFQLQTWVSMLLPCMTLPPSHHLRSRYYQTRFHLA*

Sequence

>CNT30126269
CAGTAAAACCAAAATTCAAATCCTGAAGGGAATAAAGAACCTACATGTATGGCTGAGAGTCCATCGGAACCAGTGGCTTTATCCTCTTCCTTTTCCTTCT
CCTTTTCAACTTCAAACTTGGGTTTCCATGCTGTTACCCTGTATGACTCTGCCACCTTCTCATCACTTGCGATCAAGATATTATCAAACAAGATTCCATC
TTGCATAGTCCAAATCTCAATACCAATTGCAGCTATCGGCTCGAAGTCAGGTCTTTCAAGCTCGAAGTAGTCAGGATTCGGGATCTCTTGAGGCTTCCAG
ATGCCCTTATAGTTCGGGTTATCAATTAGAGGAGCATGCCACTTCCCCTTATATGCAGGGTTCCTTTTCATTGGCCTCT