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Detailed information on CNT30124865


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3043617Physcomitrium patensPrunus dulcis56.4786.0983.44755forward
CNT3086240Physcomitrium patensVigna radiata66.1255.2281.45884forward
CNT30154607Physcomitrium patensPrunus persica60.7363.5483.13812forward

Expression of CNT30124865

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLRSIKISFVASSNEGGNNEDTSARMNSERK

>peptide 2 (53 aa)
MPSLSWIFVFTLSIVSELSTSRVIVFPVKVFTKICIPPRNLSTKCKVDSFWML*

>peptide 3 (64 aa)
EQFTDVAKALFKFHIRHKIGGTFCSIISHSTDHPGAAAPSEGWIPFGCCSQPMYDHPPIASQRR*

Sequence

>CNT30124865
CGAACAATTTACAGACGTAGCCAAGGCTTTATTTAAATTTCATATACGGCACAAAATAGGAGGTACATTCTGTTCAATAATTAGTCATTCTACAGACCAC
CCCGGAGCCGCAGCACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCCAATGTACGACCATCCTCCAATTGCTTCCCAGCGAAGATGAGACG
CTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTCGTCTTTACATTGTCAATTGTATCCGAGCTCTCGACCTCGAGGGTAATTGTCTTCCCCGTC
AAGGTCTTCACAAAAATCTGCATACCACCTCTCAAGCGCAGAACCAGATGCAAGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGCCCGTCTT
CCAATTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCGGGCGGGATGCCCTCCTTATCCTGGATCTTTGTCTTCACATTATCAATTGTGTCCGAGCTCTC
TACCTCGAGAGTAATCGTCTTCCCTGTCAAGGTCTTCACAAAAATCTGCATTCCTCCCCGCAACCTAAGCACCAAGTGCAAGGTAGACTCTTTTTGGATG
TTGTAGTCGGCAAGGGTGCGCCCATCCTCCAACTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTTGTCT
TCACGTTGTCAATTGTGTCTGAGCTCTCGACCTCGAGGGTAATCGTCTTTCCCGTCAGGGTCTTCACGAAGATCTGCATGCCTCCCCGCAACCTAAGCAC
CAAGTGCAAAGTGGACTCCTTCTGTATGTTGTAATCCGCCAGCGTTCTACCGTCCTCCAATTGCTTGCCCGCAAAGATCAACCTCTGCTGGTCAGGAGGA
ATCCCCTCCTTATCCTGGATCTTCGTCTTCACGTTATCGATTGTATCGGAGCTCTCCACCTCGAGGGTGATGGTCTTCCCAGTCAAGGTCTTTACAAAGA
TCTGCATCTTGAACTAAAAGATAACTGAAAGCAGTAATTGAGGAGATATGTAAGAGAAAAACCCAAGCTCCCTCTCACGCTAGCTTCTTCACAGCAACAC
GAACCTCTCCTACTCACTTCCACAATCAAGAGGTAGAAAGTAACAAATTCGAGGGACGGTGAGAGACCCTTGAGGTTTATATGATGATGAGCATGAACGA
GGTCAGGATGAAGCACAACGGACAAAAGAGATGGTATAAAGGATGCTCAGGTCGATAAAAATATCATTCGTCGCCTCGTCCAACGAAGGGGGCAACAATG
AGGACACTTCGGCGAGGATGAATAGCGAGAGAAAGAA