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Detailed information on CNT30124791


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONPPAT000062, E-value = 2e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500348Physcomitrium patensCoffea canephora55.2541.5983.87626forward
CNT3056329Physcomitrium patensAmborella trichopoda78.9977.4981.56895forward

Expression of CNT30124791

Peptides detected in this lncRNA

>peptide 1 (62 aa)
FTDVAKALFKFHIRHKIGGTFCSIISHSTDHPGAAAPSEGWIPFGCCSQPMYDHPPIASQRR*

Sequence

>CNT30124791
TTTACAGACGTAGCCAAGGCTTTATTTAAATTTCATATACGGCACAAAATAGGAGGTACATTCTGTTCAATAATTAGTCATTCTACAGACCACCCCGGAG
CCGCAGCACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCCAATGTACGACCATCCTCCAATTGCTTCCCAGCGAAGATGAGACGCTGCTGG
TCCGGTGGGATTCCCTCCTTGTCCTGAATCTTCGTCTTTACATTGTCAATTGTATCCGAGCTCTCGACCTCGAGGGTAATTGTCTTCCCCGTCAAGGTCT
TCACGAAGATCTGCATGCCTCCCCTCAACCTAAGCACTAAGTGTAAAGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTCCCGTCTTCCAATTG
CTTTCCTGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTTACATTGTCAATTGTGTCCGAGCTCTCAACTTCG
AGGGTAATCGTCTTTCCCGTCAAGGTCTTCACAAAAATCTGCATTCCTCCCCGCAACCTAAGCACCAAGTGCAAGGTAGACTCTTTTTGGATGTTGTAGT
CGGCAAGGGTGCGCCCATCCTCCAACTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTTGTCTTCACGTT
GTCAATTGTGTCTGAGCTCTCGACCTCGAGGGTAATCGTCTTTCCCGTCAGGGTCTTCACGAAGATCTGCATGCCTCCCCGCAACCTAAGCACCAAGTGC
AAAGTGGACTCCTTCTGTATGTTGTAATCCGCCAGCGTTCTACCGTCCTCCAATTGCTTGCCCGCAAAGATCAACCTCTGCTGGTCAGGAGGAATCCCCT
CCTTATCCTGGATCTTCGTCTTCACGTTATCGATTGTATCGGAGCTCTCCACCTCGAGGGTGATGGTCTTCCCAGTCAAGGTCTTTACAAAGATCTGCAT
CTTGAACTAAAAGATAACTGAAAGCAGTAATTGAGGAGATATGTAAGAGAAAAACCCAAGCTCCCTCTCACGCTAGCTTCTTCACAGCAACACGAACCTC
TCCTACTCACTTCCACAATCAAGAGGTAGAAAG