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Detailed information on CNT30124766


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-149

BLAST vs NONCODE:
NONPPAT000062, E-value = 2e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525291Physcomitrium patensPhaseolus vulgaris71.1251.0581.98655forward

Expression of CNT30124766

Peptides detected in this lncRNA

>peptide 1 (64 aa)
EQFTDVAKALFKFHIRHKIGGTFCSIISHSTDHPGAAAPSEGWIPFGCCSQPMYDHPPIASQRR*

Sequence

>CNT30124766
GAACAATTTACAGACGTAGCCAAGGCTTTATTTAAATTTCATATACGGCACAAAATAGGAGGTACATTCTGTTCAATAATTAGTCATTCTACAGACCACC
CCGGAGCCGCAGCACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCCAATGTACGACCATCCTCCAATTGCTTCCCAGCGAAGATGAGACGC
TGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTCGTCTTTACATTGTCAATTGTATCCGAGCTCTCGACCTCGAGGGTAATTGTCTTCCCCGTCA
AGGTCTTCACAAAAATCTGCATTCCTCCCCGCAACCTAAGCACCAAGTGCAAGGTAGACTCTTTTTGGATGTTGTAGTCGGCAAGGGTGCGCCCATCCTC
CAACTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTTGTCTTCACGTTGTCAATTGTGTCTGAGCTCTCG
ACCTCGAGGGTAATCGTCTTTCCCGTCAGGGTCTTCACGAAGATCTGCATGCCTCCCCGCAACCTAAGCACCAAGTGCAAAGTGGACTCCTTCTGTATGT
TGTAATCCGCCAGCGTTCTACCGTCCTCCAATTGCTTGCCCGCAAAGATCAACCTCTGCTGGTCAGGAGGAATCCCCTCCTTATCCTGGATCTTCGTCTT
CACGTTATCGATTGTATCGGAGCTCTCCACCTCGAGGGTGATGGTCTTCCCAGTCAAGGTCTTTACAAAGATCTGCATCTTGAACTAAAAGATAACTGAA
AGCAGTAATTGAGGAGATATGTAAGAGAAAAACCCAAGCTCCCTCTCACGCTAGCTTCTTCACAGCAACACGAACCTCTCCTACTCACTTCCACAATCAA
GAGGTAGAAAGTAACAAATTC