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Detailed information on CNT30123665


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONPPAT000062, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30418468Physcomitrium patensPapaver somniferum77.6991.6980.161104forward

Expression of CNT30123665

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MQGRLLLNVIISKSTTIFQLFARKDQPLLVGRNTFLILDLSLNIINSIRALNLKSDCFSSQSLYKNLHPSP*

>peptide 2 (62 aa)
MSLCWSGGIPSLSCIFVFTLSMVSELSTSKVMVFPVRVFTKICILVSPLLTSQQFQANRQLH*

>peptide 3 (40 aa)
MWTPSECCSLQEYDHPLTAFRQRLAVADQVEYLPCLESWS*

>peptide 4 (31 aa)
MVSELSTSNVIVFPVNVLTNICIPPLRRNTR*

>peptide 5 (34 aa)
QPNFYRAGHNMAVTAIYCSNVHYQYEQLLFNSLL*

>peptide 6 (37 aa)
MVSELSTSNVIVFPVSVFTNICIPPLKRRTKCRVDSF*

Sequence

>CNT30123665
ACAGCCTAACTTCTACAGAGCTGGGCACAACATGGCTGTGACAGCTATCTACTGTTCAAACGTCCACTATCAGTACGAACAATTACTCTTCAATAGCCTC
CTCTGAGGCGAAGCACCAGATGCAAGGTAGACTCCTTCTGAATGTTATAATCAGCAAGAGTACGACCATCTTCCAGCTGTTTGCCCGCAAAGATCAACCG
TTGCTGGTCGGGAGGAATACCTTCCTTATCCTGGATCTTAGTCTTAACATTATCAATAGTATCAGAGCTCTCAACCTCAAGAGTGATTGTTTTTCCAGTC
AGAGTCTTTACAAAAATCTGCATCCCTCCCCTTAGACGAAGAACAAGATGTAATGTGGACTCCTTCTGAATGTTGTAGTCTGCAAGAGTACGACCATCCT
CTAACTGCTTTCCGGCAAAGATTAGCCGTTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACGTTATCTATGGTATCAGAACTCTC
CACCTCCAATGTAATAGTCTTTCCCGTAAGCGTCTTCACGAATATTTGCATCCCTCCTCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCCTTCTGAATG
TTGTAATCAGCCAAAGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATAAGTCTCTGCTGATCCGGGGGAATTCCTTCTTTGTCCTGAATCTTAGTCT
TCACGTTGTCGATGGTGTCAGAACTTTCCACTTCTAATGTGATAGTCTTCCCCGTCAACGTCTTAACAAATATTTGCATACCGCCCCTCAGGCGCAACAC
CAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGCCAGAGTACGCCCATCCTCCAACTGCTTTCCGGCAAAAATCAATCGTTGCTGGTCAGGTGGA
ATACCTTCTTTGTCTTGAATCTTCGTCTTAACGTTATCAATAGTATCTGAGCTCTCAACTTCCAACGTAATCGTCTTCCCCGTCAGCGTTTTGACGAATA
TTTGCATGCCACCTCTCAAACGCAACACAAGGTGCAACGTGGACTCCTTCTGGATGTTATAATCGGCCAACGTCCGCCCATCCTCCAACTGCTTCCCGGC
GAAGATGAGCCTCTGCTGGTCGGGAGGGATCCCCTCCTTGTCCTGTATCTTCGTCTTCACATTGTCGATGGTATCCGAGCTCTCGACCTCCAAGGTTATG
GTCTTCCCCGTCAGGGTCTTCACAAAGATCTGCATCTTGGTATCACCTCTACTCACTTCACAACAATTTCAAGCTAATAGACAGCTGCACTAAAGTATCT
CGCCAACTTCTCCGTACGCTGGTTTCCCAACTACGCTCACACCCTTGATATCCGAGACACAGCCAAGCGAGTGGATTCAGGAACAGAATGAGGGACTTGC
GCTGAAGAGCAGCTCTCTTAT