Detailed information on CNT3012366


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671533Zea maysSetaria viridis83.6358.1386.71286forward
CNT30304550Zea maysTriticum aestivum39.7750.7589.71136forward
CNT30256621Zea maysAvena sativa40.3546.1587.68138forward
CNT30722976Zea maysTriticum spelta40.0640.6589.78137forward
CNT30366548Zea maysSorghum bicolor83.0442.6491.9284forward
CNT30319891Zea maysAsparagus officinalis38.69.9881.82132forward

Expression of CNT3012366

Peptides detected in this lncRNA

>peptide 1 (81 aa)
GYEIASDREATMETPVANFSISTTESPLRPRRMSWSCLEPTLSARAMSTLVYSSSRLHSFLSYAIFFSALVRLIAIAAEER*

Sequence

>CNT3012366
GGGTACGAGATCGCCAGTGACAGGGAGGCAACCATGGAGACACCAGTGGCAAACTTCTCAATCAGCACCACCGAGTCGCCCCTGAGGCCCCGGCGGATGT
CCTGGAGCTGCTTGGAACCGACGTTGTCGGCCAGGGCGATGAGCACCTTGGTGTACTCATCGAGCAGGCTGCACAGCTTCTTGTCGTACGCGATCTTCTT
CTCCGCCTTAGTCCGCTTGATCGCCATCGCTGCAGAGGAACGCTAACCCTAGCTGGAGGAACGGATCTGTGAAGGGGGGAGTGGAGATACAAGGAGGAGG
ACCAAGCCTTCGTGAAGGGCAAGGCGGACGGCTTGCGGCGGC