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Detailed information on CNT30123042


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701953Physcomitrium patensQuercus lobata14.9323.9187.8866forward
CNT30566785Physcomitrium patensActinidia chinensis14.0323.3188.7162forward
CNT30606370Physcomitrium patensGossypium raimondii13.3528.2388.1459forward
CNT30175658Physcomitrium patensVigna angularis16.9730.3686.6775forward

Expression of CNT30123042

Peptides detected in this lncRNA

>peptide 1 (57 aa)
HKSTMAALQAIAGCHKTDEANICLEFSDLKRNATLIDQLRMIQIFKNLQKFKENYIG*

>peptide 2 (51 aa)
TQIYYGGATSHSRVSQDRRSKHMSGILRLKAQCDPDRSTENDSNIQELAKV*

Sequence

>CNT30123042
ACACAAATCTACTATGGCGGCGCTACAAGCCATAGCAGGGTGTCACAAGACAGACGAAGCAAACATATGTCTGGAATTCTCAGACTTAAAGCGCAATGCG
ACCCTGATAGATCAACTGAGAATGATTCAAATATTCAAGAACTTGCAAAAGTTTAAAGAAAATTACATCGGATGAGTTACTGATCAACTCTCTTAAGAAA
ATTTCCTTGTTGCTGTAGAAAGTGTTGATAATCAAACTAAGCAACTGGTTGATCTCCGCCTGGAAGGCGAAGAAAAATAGTGGGACACAATCCACGCCCC
TGGTCGAATCCCGCGAAAGAAACCTCGTTAACGAAACTGGAGTATAGGTCAATCGATTGAGCCCTAACGGCTACTGAACGACCGAAGTAATATGTTCCGA
ATGCAGCAGAGGGTGAGAGCTGTAAACACCGAGAGACGACGT