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Detailed information on CNT30121164


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524932Citrus clementinaPhaseolus vulgaris44.0561.6282.01289forward
CNT30573937Citrus clementinaVitis vinifera62.563.0882.2410forward
CNT3051546Citrus clementinaAmborella trichopoda51.5270.1283.14338forward

Expression of CNT30121164

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MLGCRKERLGCTMVRWGCMQVRWGYMPVRWGYSLVTWDCIQEMTDCSLVMMGCIQVMK*

>peptide 2 (28 aa)
MIRSPRHRRTSRCHAKLQTFHITRKLKFD

Sequence

>CNT30121164
ACTTGACCACATATCGCACTATGGCTTACCTGTAATTTGGAGATGTAGGGCTGTACGGACTGGCAGGAGATAATCTTGGACTACTTGGTGAGTAGGCCAG
CGACGGACTGTATTTGGCAGACTGAGGATTGTAGCTTGGGGATGTAGGACTATAGGTTGGTGAAGTTGGGCTATAACTTGGTGAAGTTGGACTATAACCA
GGAGAAGTGGGGCTATAGGCTGGTGAAGTGGGGCTGTACGATGGAGAAGTGGGGCTGTATGACGGTGAGGTAGGGCTGTACGAAGGTGATGTTGGGCTGT
AGGAAGGAGAGGTTGGGCTGTACGATGGTGAGGTGGGGCTGTATGCAGGTGAGGTGGGGCTATATGCCGGTGAGGTGGGGCTATAGCTTGGTGACGTGGG
ACTGTATCCAGGAGATGACGGACTGTAGCCTGGTGATGATGGGCTGTATCCAGGTGATGAAGTAGGAGAGAAGGCCATTCCACCAACATAAGGAGAAAAC
TGGGCATCCGTGACCGGGGACAGACGGAGATTTGGGCTAAACAAGTAACCTGGAGACATCATGCCATCATGATAAGGAGTCCCAGACACCGGAGAACGAG
CAGGTGTCATGCCAAACTCCAGACCTTCCATATAACTAGGAAGCTGAAGTTCGATG