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Detailed information on CNT30121121


BLAST search results

BLAST vs Swiss-Prot:
sp|P18616|NRPB1_ARATH, E-value = 2e-125

BLAST vs NONCODE:
NONGMAT000067, E-value = 7e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378908Citrus clementinaManihot esculenta65.4293.0182.46878forward
CNT30410142Citrus clementinaPapaver somniferum34.2869.9180.87460forward

Expression of CNT30121121

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MIRSPRHRRTSRCHAKLQTFHITRKLKFDGIFQHLIIEIQ*

>peptide 2 (71 aa)
MLGCRKERLGCTMVRWGCMQVRWGYMPVRWGYSLVKLDCNWEKWGCNLERSGCSLGMLGCNLGRLGYSLVK*

Sequence

>CNT30121121
CTGTAATTTGGAGATGTAGGGCTGTACGGACTGGCAGGAGATAATCTTGGACTACTTGGTGAGTAGGCCAGCGACGGACTGTATTTGGCAGACTGAGGAT
TGTAGCTTGGGGATGTAGGACTATAGGTTGGTGAAGTTGGGCTATAACTTGGTGAAGTTGGACTATAACCAGGAGAAGTGGGGCTATAGGCTGGTGAAGT
GGGGCTGTACGATGGAGAAGTGGGGCTGTATGACGGTGAGGTAGGGCTGTACGAAGGTGATGTTGGGCTGTAGGAAGGAGAGGTTGGGCTGTACGATGGT
GAGGTGGGGCTGTATGCAGGTGAGGTGGGGCTATATGCCGGTGAGGTGGGGCTATAGCTTGGTGAAGTTGGACTGTAACTGGGAGAAGTGGGGCTGTAAC
TTGGAGAGGTCGGGCTGTAGCTTGGGGATGTTGGGCTGTAACTTGGGGAGGTTGGGCTATAGCTTGGTGAAGTAGGTGAGTACGATGGACTGGTAGGAGA
ATAGGCAGGACTGGTTGGACTATAACCAGGAGAACTTGGACTATAAGTTGGTGAGGTAGGGCTATATCCAGGCGAGGTGGGACTGTATCCAGGAGATGAC
GGACTGTAGCCTGGTGATGATGGGCTGTATCCAGGTGATGAAGTAGGAGAGAAGGCCATTCCACCAACATAAGGAGAAAACTGGGCATCCGTGACCGGGG
ACAGACGGAGATTTGGGCTAAACAAGTAACCTGGAGACATCATGCCATCATGATAAGGAGTCCCAGACACCGGAGAACGAGCAGGTGTCATGCCAAACTC
CAGACCTTCCATATAACTAGGAAGCTGAAGTTCGATGGCATTTTTCAGCATCTCATCATTGAGATACAATGAACAGTCTCCTGTCCCAATAGGCGCAAGC
TGACCTAACATTATATTCTCAGTGACCCCCCTCAAATAATCTGATTCTGCAAAGACTGCAGCATCAAGAAGAATGTCAACCGTTTCTTCAAATGAACATC
TCATCATTGGTCCAGTATCATTCCTGTTGATGCCATGACGAGTGATGGCCATCAAGTGGCCTCGATAGGTCATCGTATCACAAAGTATAGCCAGATCTTC
ATGACACATAACGGCTAAAAGATTCACACCTTCAGTATCCAGCATCCACTCATCTTCCGACTTAAATCCTTCATTATCATCATATTTGGTTGTTTTACCC
TTTTTAATAAACACCTTGTTGATATCAGGGATACCTCGAAGAGCCATTTCTGTCAGCATGTTACTCTCAATCTTCTTCAAGAAAACATCATCTTCAGCTG
ATTCATCATTCAATTCTCCCTTTGGAGCTTCATCATTCATTA