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Detailed information on CNT30120918


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632595Citrus clementinaVigna unguiculata10061.4796.55753forward

Expression of CNT30120918

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MITRRIARPPCRRRIIQISALSTFDGRIEAYHGGDG*

>peptide 2 (46 aa)
EGMHLLDKRSTRALPVALMIHDNSTDRKATVPATHHSNFCPINFRW*

Sequence

>CNT30120918
TGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCAAGGCCACCGTGCCGGC
GACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAG
AGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCG
GGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGC
TCCAATAGCGTATATTTAAGTTGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCT
GGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATA
TTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGTTGGGTCGGCCGGTCCGCCTCGCGGTGTGCACCGGCCGGCTCGTCCCTTCTGCCGGCG
ATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCACCGGCGCTGTTACTTTGA