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Detailed information on CNT30120766


BLAST search results

BLAST vs Swiss-Prot:
sp|P46293|RS16_GOSHI, E-value = 1e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696918Citrus clementinaOryza sativa23.6625.6581.25128forward
CNT30517680Citrus clementinaJuglans regia26.439.8186.01143forward
CNT3043803Citrus clementinaPrunus dulcis23.6624.4389.06128forward
CNT30568235Citrus clementinaActinidia chinensis34.9463.2184.13189forward
CNT3083687Citrus clementinaVigna radiata39.3722.482.16213forward
CNT30555324Citrus clementinaOryza glaberrima23.6634.8881.25128forward
CNT30232050Citrus clementinaAnanas comosus31.6115.0180.12171forward
CNT30625853Citrus clementinaDaucus carota36.0415.1981.03195forward
CNT30620437Citrus clementinaCajanus cajan24.2118.3787.02131forward
CNT30151249Citrus clementinaBrachypodium distachyon23.6624.5780.47128forward
CNT30104226Citrus clementinaOryza rufipogon23.6626.7881.25128forward
CNT30118078Citrus clementinaOryza nivara23.6620.3881.25128forward
CNT30176592Citrus clementinaVigna angularis38.8225.7781.43210forward

Expression of CNT30120766

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSTPANRCRPSKRIGSYALKRRISGSTNSIGQPLILINPRPRLQ*

Sequence

>CNT30120766
CTTCAACAGTAATTCATTACCGCCTCACCAAAGCCTTAATATCTCATAAACTACTAACATTTAATGATCCAGTCTCAAAATAACCAAAATTTCATAAAAA
AGTAAAACAAACAAACTAAAATAGCAAAACGAAAAGCCGTTTCGTTTCGCTTCCTTGCATTCCCGCTCAACGGTAACTCTTCTGGAACCGAGCCCTAGCG
CCACGTCCACCGAACTTCTTGGGCTCGCACCGGCGTGGATCTGCGACGTGTGTCCCCCGCCCTTCACGCGGATTCTCATGTCCACGCCGGCGAATCGGTG
TCGCCCGAGCAAGAGAATTGGCTCGTATGCCTTGAAGCGGAGGATCTCCGGCTCGACTAACTCGATCGGGCAGCCGTTAATCTTGATCAACCCACGACCG
CGCTTGCAGTAAGTCACGGCGACCGCAGTCTTCTTGCGGCCGAAGCATTGTACAGATTCCACTGGACCTGCTTTTGCTGTCGCCATTTTCTGTTAGGGTT
TGCTATGAGGGTAGCGCGCGCGCGACACACAGAGAAACCCT