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Detailed information on CNT30120738


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639077Citrus clementinaCapsicum annuum98.8451.1195.78854forward
CNT30212627Citrus clementinaHelianthus annuus98.7383.7994.72853forward

Expression of CNT30120738

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGADPGGRHCQVGSLAGATHLLKDNAGVLR*

Sequence

>CNT30120738
TGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGGAAACGGCGAAAGTGAAATACCACTACTTTTAACG
TTATTTTACTTATTCCGTGAATCGGAGGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCCCCCGCATGGGGGCCGATCCGGGCGGAAGACATTGTCAGG
TGGGGAGTTTGGCTGGGGCGACACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAA
AAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAA
ATTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAAT
TCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACTGCGTCGTA
ATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTA
TGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAGCGACGCGTGCGCCCGCCGCCCGTTTGCCGACCCGCAGTAGGGACCTCCCGGTCCCCAGAGGCAC
GTGTCGTAGGCCAAGCCCCCGCGGCGGAAGGGCCGCGGCGGCCGCCTTGAATCGTAATTCCCAT