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Detailed information on CNT30120625


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 6e-99

BLAST vs NONCODE:
NONGMAT000502, E-value = 3e-74

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528491Citrus clementinaEucalyptus grandis42.0352.3490.2459forward
CNT30316048Citrus clementinaCorylus avellana39.5633.8689.12432forward
CNT30513516Citrus clementinaJuglans regia42.0358.489.11459forward
CNT30699961Citrus clementinaQuercus lobata42.1243.4888.91460forward
CNT30712762Citrus clementinaGlycine max41.7652.686.84456forward
CNT30157652Citrus clementinaPistacia vera41.6751.4188.13455forward
CNT30127456Citrus clementinaCorymbia citriodora41.9457.6889.08458forward
CNT3066524Citrus clementinaSelaginella moellendorffii41.4871.3487.64453forward

Expression of CNT30120625

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MSLCWSGGIPSLSWIFAFTLSIVSELSTSRVIVFPVRVLTKICMPPRRRRTRWRVDSFWML*

Sequence

>CNT30120625
ATGAGAAAATTTGAGAATATATATATTTAAAAACTACTGCTTATATTATTATTGCTGATAGAAAGAGGAAATTAGGCCCAAGCGGCTGGCCATTACACAA
TTGTAATTACAAAATAATTAAAGCAAAGCGCCCAATCCAACCTAATTAATTATTATTAGCGCCATCCAATCAAACGCGGACACATCCACATATATTTTTT
TAGAAGTCACCACCACGGAGACGGAGGACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGG
CGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGAT
CGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCATGCCGCCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAG
GTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCG
TGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCATCTGTTAATCGGAACGAGCACGGAAAAGTGACGCCCG
GGGGCCGGTTTATATAGAGATGTTTGCCGACTTGACGAGGAAATATCGCGAGCTAATTCCAAGAAGGTAACGCTTCCACGCACTTAATGCAAACACGCTA
ACGAAGGATCACCGTTCATTTAGCTGACGCTAAAAGTTGGTACTAAACGGCGACAGATCCACGGGTCCCACGACGCGCTGCTCCGCTCCACTACCGTCTC
ATGGTAGCCCACCAACCATTTCGGTCGTTAAGAAAATTAATTATATCCGAAGAAGAAAGAAAACGGCTAGTTATAATATTAAATTAAATTTAAAAAAAAA
TATAATTTAAATTCATTTTGGTAAAGAGTATTGTTGTTTTTTTTATATTTTAGTTTGTGTATATATAAAAATATTCAATGGAAGGTGGTAGC