« Back to Citrus clementina search


Detailed information on CNT30120587


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615929Citrus clementinaSesamum indicum85.7434.1481.261142forward
CNT30568725Citrus clementinaActinidia chinensis84.7697.3381.41129forward
CNT30608559Citrus clementinaGossypium raimondii85.6674.7781.771141forward
CNT30418468Citrus clementinaPapaver somniferum85.7494.8579.861142forward

Expression of CNT30120587

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVSELSTSRVIVLPVKVFTKICISNRAFSCERRKN*

>peptide 2 (51 aa)
MPPRSLRTRCEELTLSGYYSQPTYGRLPIVFQQRSIFVDLVGSPPCLGSWP*

>peptide 3 (48 aa)
MQGGFFLDVVIGQGAAVFQLLASKDQPLLVRGDSLLVLNLRLNVIDRV*

Sequence

>CNT30120587
CAAAAGACGGAAACAGAGCACCATAACCCAAAAGCAACAAACTAATTCATGACGGAACCAACAATAACCCAACCAAACAAAGACACAAGCACAACTTAAC
AACCATCTCAGCATTCACCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCCTCTAGCTG
CTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCC
AGAGTAATAGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCATGCCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGT
CAGCCAACGTGCGGCCGTCTTCCAATTGTTTCCCGGCAAAGATCAATCTTTGTTGATCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATT
ATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCATGCCACCACGGAGCCTGAGGACAAGATGT
GAAGAGTTGACTCTTTCTGGATATTATAGTCAGCCAACGTACGGCCGTCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATCCC
CTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGC
ATGCCACCACGGAGCCTGAGGACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAAGA
TCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTAACGTTATCGATCGTGTCTGAGCTCTCAACCTCGAGGGTTATCGTCTT
CCCGGTTAGGGTTTTGACAAAGATCTGCATGCCTCCGCGGAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGCCAAGGTGCGG
CCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCCG
AGCTCTCGACTTCGAGAGTAATAGTTTTGCCGGTCAAGGTTTTCACGAAGATCTGCATATCGAACAGAGCTTTTTCTTGCGAACGAAGGAAGAATTGATA
ATTGTTGCGATCAAGATGATGAAATGATGAGT