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Detailed information on CNT30120547


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FF53|PIP24_ARATH, E-value = 4e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Citrus clementinaOryza sativa33.8611.2384.8886forward
CNT30221191Citrus clementinaHordeum vulgare20.0824.0688.2451forward
CNT30568309Citrus clementinaActinidia chinensis22.055.4289.2956forward
CNT30586754Citrus clementinaMusa acuminata29.1327.4186.4974forward
CNT30681057Citrus clementinaTriticum urartu25.596.3889.2365forward
CNT30572629Citrus clementinaVitis vinifera23.2322.1886.4459forward
CNT3024289Citrus clementinaPopulus trichocarpa88.9846.1280.97226forward
CNT30331328Citrus clementinaDioscorea rotundata22.0510.9287.556forward
CNT30112022Citrus clementinaFicus carica32.6829.4386.7583forward
CNT3050391Citrus clementinaCucumis sativus22.058.8187.556forward

Expression of CNT30120547

Peptides detected in this lncRNA

>peptide 1 (65 aa)
ENSVDKNKGTNDLSTQSSASAVPISELIGSTAVSCVVRLLESLNEPAATYGSQTLSHHVHYGSHQ*

Sequence

>CNT30120547
GAGAAAACAGTGTAGACAAGAACAAAGGTACCAATGATCTCAGCACCCAATCCAGTGCCAGTGCTGTACCCATCAGCGAGCTCATTGGCTCCACCGCCGT
ATCTTGTGTAGTAAGACTTCTGGAAAGCCTTAACGAGCCCGCAGCCACATATGGCTCCCAAACACTGAGCCACCATGTACATTACGGCTCGCACCAGTGA
CACCTTCCGCGCCAAGAACAGCCCAAATGTCACCGCCGGGTTAATGTGTCCACC