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Detailed information on CNT30120542


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-157

BLAST vs NONCODE:
NONGMAT000502, E-value = 8e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406245Citrus clementinaBeta vulgaris62.5796.9382.91632forward

Expression of CNT30120542

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MQGGFFLDVVIGQGAAIFELLSGEDQTLLIRRDPLLVLDLGLDVVDCVRALHFESDRFAG*

Sequence

>CNT30120542
ATTTTTTATTCACCACTGCATAAAACTTGTTCAACAAAAGACGGAAACAGAGCACCATAACCCAAAAGCAACAAACTAATTCATGACGGAACCAACAATA
ACCCAACCAAACAAAGACACAAGCACAACTTAACAACCATCTCAGCATTCACCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATGT
TATAATCAGCAAGGGTACGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTT
GACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCATGCCTCCACGGAGACGGAGGACA
AGGTGAAGAGTTGACTCTTTCTGGATGTTATAGTCAGCCAACGTGCGGCCGTCTTCCAATTGTTTCCCGGCAAAGATCAATCTTTGTTGATCTGGTGGGA
TCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGAT
CTGCATGCCACCACGGAGCCTGAGGACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCG
AAGATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCG
TTTTGCCGGTTAGGGTTTTCACGAAGATCTGCATATTGACAAAGGTTGTTTATCTAGCGAGCAAAGAGAGAGATTTTACAATTGTTTTGAGAGAGTAATG
AGAATGATGATAATAAATTGAGCGCGTTGGGTTTATATAAGAAAGCCTAACCCTTGTCGAACGATTCAGATGGAGGGCGGATTCGTGGTACTAGAATGTA
AAGGAATGGT