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Detailed information on CNT30120531


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-97

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200107Citrus clementinaPisum sativum81.4688.2681.59782forward

Expression of CNT30120531

Peptides detected in this lncRNA

>peptide 1 (56 aa)
PKSNKLIHDGTNNNPTKQRHKHNLTTISAFTTTKTEDKMEGGLLLDVIISKGTAVL*

>peptide 2 (52 aa)
MQGGFFLDVVIGQGAAIFELLSGEDQTLLIRRDPLLVLDLGLDVVDCVRALHF

Sequence

>CNT30120531
AACCCAAAAGCAACAAACTAATTCATGACGGAACCAACAATAACCCAACCAAACAAAGACACAAGCACAACTTAACAACCATCTCAGCATTCACCACCAC
GAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTG
CTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTCTTCCCAGTCAAA
GTCTTGACAAAAATTTGCATGCCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGTCAGCCAACGTGCGGCCGTCTTCCA
ATTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTCTCGAC
CTCGAGGGTAATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCATGCCGCCACGGAGCCTGAGCACGAGGTGAAGAGTTGACTCTTTCTGGATATTA
TAGTCAGCCAACGTACGGCCGTCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGA
CATTATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCATGCCACCACGGAGCCTGAGGACAAG
ATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATC
CCCTCCTTGTGCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGAGCTCTCCACTTCG