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Detailed information on CNT30120512


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375565Citrus clementinaArabidopsis thaliana27.7633.685.5483forward
CNT30282953Citrus clementinaChenopodium quinoa20.7416.4587.162reverse complement
CNT30728842Citrus clementinaCorchorus capsularis30.7726.5188.0492forward
CNT3070603Citrus clementinaQuercus suber55.8543.9584.43167forward
CNT30525480Citrus clementinaPhaseolus vulgaris90.312.6282.22270forward
CNT30632211Citrus clementinaVigna unguiculata37.1236.5184.68111forward
CNT30710681Citrus clementinaGlycine max39.816.4486.55119forward
CNT30159576Citrus clementinaPistacia vera88.6333.4682.26265forward
CNT30221132Citrus clementinaHordeum vulgare20.7426.8487.162forward
CNT3084566Citrus clementinaVigna radiata34.1117.3289.22102forward
CNT30542732Citrus clementinaBrassica napus29.112.9585.0687forward
CNT30145515Citrus clementinaMedicago truncatula27.7633.8891.5783forward
CNT30436848Citrus clementinaAegilops tauschii28.7629.2584.8886forward
CNT30599410Citrus clementinaFraxinus excelsior28.7612.9787.2186forward
CNT30653715Citrus clementinaRosa chinensis20.7410.6387.162forward
CNT30213185Citrus clementinaHelianthus annuus91.9749.7380.36275forward
CNT30479174Citrus clementinaArabidopsis halleri27.7615.5785.5483forward
CNT30704435Citrus clementinaPrunus avium44.8220.2788.06134forward
CNT3035626Citrus clementinaCucumis melo21.7411.6189.2365forward
CNT30724415Citrus clementinaLupinus angustifolius22.4111.6594.0367forward

Expression of CNT30120512

Peptides detected in this lncRNA

>peptide 1 (80 aa)
GNVGVPSISLGISGGENSVDKNKGTNDLSTQSSASAVPISELIGSTAVSCVVRLLESLNEPAATYGSQTLSHHVHYGSHQ*

Sequence

>CNT30120512
ACGGGAACGTGGGAGTCCCTAGCATTTCTCTTGGGATCAGTGGCGGAGAAAACAGTGTAGACAAGAACAAAGGTACCAATGATCTCAGCACCCAATCCAG
TGCCAGTGCTGTACCCATCAGCGAGCTCATTGGCTCCACCGCCGTATCTTGTGTAGTAAGACTTCTGGAAAGCCTTAACGAGCCCGCAGCCACATATGGC
TCCCAAACACTGAGCCACCATGTACATTACGGCTCGCACCAGTGACACCTTCCGCGCCAAGAACAGCCCAAATGTCACCGCCGGGTTAATGTGTCCACC