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Detailed information on CNT30120507


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-134

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30238962Citrus clementinaBrassica oleracea83.7347.1382.22911forward
CNT30214147Citrus clementinaHelianthus annuus61.1282.7183.31665forward
CNT30623964Citrus clementinaDaucus carota81.3442.9683.28885forward
CNT30111644Citrus clementinaFicus carica83.826482.35912forward
CNT30334110Citrus clementinaCynara cardunculus83.6485.7782.31910forward
CNT30114931Citrus clementinaEutrema salsugineum83.6482.0682.75910forward

Expression of CNT30120507

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVSELSTSRVIVLPVKVFTKICISNRAFSCERRKN*

>peptide 2 (46 aa)
EQTRRQADNILRIHHHEGGAQDGGWTPSECYNQLKYGHPQAASQQR*

>peptide 3 (48 aa)
MKGRLLLDVIIRKSPSILKLFASEDQTLLIRWNSFLVLDFCLDIVNCV*

>peptide 4 (33 aa)
NRHGGKQITFLEFTTTKAEHKMEGGLLLNVIIS*

Sequence

>CNT30120507
AGAACAGACACGGCGGCAAGCAGATAACATTCTTAGAATTCACCACCACGAAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAG
CTAAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATC
AATAGTATCTGAGCTCTCCACCTCCAGAGTAATAGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCATACCACCCCTCAGGCGCAGAACCAGATGAAGG
GTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGAATTCCTTCCT
TGTCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCATGCC
TCCCCTGAGACGAAGAACAAGGTGGAGAGTTGACTCTTTCTGAATGTTGTAATCGGCCAAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAAT
CTTTGCTGGTCCGGCGGTATCCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTATCAATCGTATCCGAACTCTCCACCTCCAGAGTGATCGTCTTCCCAG
TTAGGGTTTTGACGAAGATCTGCATACCACCACGGAGCCTGAGGACGAGATGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTC
CTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCCGAGCTC
TCGACTTCGAGAGTAATAGTTTTGCCGGTCAAGGTTTTCACGAAGATCTGCATATCGAACAGAGCTTTTTCTTGCGAACGAAGGAAGAATTGATAATTGT
TGCGATCAAGATGATGAAATGATGAGTGAAGCGCTAGAGGTTCGTGCTTGGTTATATAGCAAAGCTAACCGACTCGTTGAACGGTTCA