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Detailed information on CNT30120451


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30402284Citrus clementinaBeta vulgaris16.1531.0589.7168forward
CNT30525466Citrus clementinaPhaseolus vulgaris16.1522.988.2468forward
CNT3026393Citrus clementinaPopulus trichocarpa20.1921.5287.0685forward

Expression of CNT30120451

Peptides detected in this lncRNA

>peptide 1 (46 aa)
TEHPRPRLMKLKTKDSIIKIYIKKKSQSRGENQKSLSSSNSSLSTN*

Sequence

>CNT30120451
AACTGAACATCCGAGACCCAGATTAATGAAACTGAAAACAAAGGATTCAATTATTAAAATATATATAAAAAAAAAAAGCCAAAGTCGGGGAGAAAACCAA
AAAAGTTTGAGCAGCAGCAACAGCAGCCTAAGTACAAATTAAACGCAAACCGAACCCCCATTGATCGAATGATCATTATGGGCAGCTTCCACATTGTCCA
GTAGCGTCCATCGTAGTATCCTGGTGACCTGTGGTGCTCACGGTACACCCATCCTTTCTGCAGTCACGCCACCCAATAGAAAAAACAAAAAAAAAAAAAT
CAAATATCACCACCCATTTGCCTGATAAAATCCGCTTATAACCCAAAAGCTTAGATTTTAAGTAAGCAATTGTTAATGCAGGTTTTGATATTGAATGGAT
ATCTCTGACCAATAGATTCAT