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Detailed information on CNT30120444


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-159

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532219Citrus clementinaEucalyptus grandis85.7781.3380.411368forward
CNT30701438Citrus clementinaQuercus lobata80.1387.5979.891278forward
CNT30279009Citrus clementinaChenopodium quinoa81.7685.3481.131304forward
CNT30525141Citrus clementinaPhaseolus vulgaris81.0774.779.511293forward
CNT3097927Citrus clementinaSolanum tuberosum82.6399.1780.121318forward
CNT30311152Citrus clementinaCamelina sativa68.8468.0781.61098forward
CNT3066849Citrus clementinaLeersia perrieri71.4785.3380.611140forward
CNT30623804Citrus clementinaDaucus carota84.0163.0681.191340forward
CNT30355742Citrus clementinaLactuca sativa71.2272.6380.91136forward
CNT30418420Citrus clementinaPapaver somniferum68.2163.2980.151088forward
CNT30324534Citrus clementinaAsparagus officinalis66.3982.882.251059forward

Expression of CNT30120444

Peptides detected in this lncRNA

>peptide 1 (56 aa)
PKSNKLIHDGTNNNPTKQRHKHNLTTISAFTTTKTEDKMEGGLLLDVIISKGTAVL*

>peptide 2 (35 aa)
MVSELSTSRVIVLPVRVFTKICISNRAFSCERRKN*

>peptide 3 (48 aa)
MKGRLLLDVIIRKSPSILKLFASEDQTLLIRWNSFLVLDFCLDIVNCV*

Sequence

>CNT30120444
AACCCAAAAGCAACAAACTAATTCATGACGGAACCAACAATAACCCAACCAAACAAAGACACAAGCACAACTTAACAACCATCTCAGCATTCACCACCAC
GAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTG
CTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTCTTCCCAGTCAAA
GTCTTGACAAAAATTTGCATGCCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGTCAGCCAACGTGCGGCCGTCTTCCA
ATTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTCTCGAC
CTCGAGGGTAATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCATGCCGCCACGGAGCCTGAGCACGAGGTGAAGAGTTGACTCTTTCTGGATATTA
TAGTCAGCCAACGTACGGCCGTCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGA
CATTATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTCTTGACAAATATCTGCATACCACCCCTCAGGCGCAGAACCAG
ATGAAGGGTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGAATT
CCTTCCTTGTCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCT
GCATGCCTCCCCTGAGACGAAGAACAAGGTGGAGAGTTGACTCTTTCTGAATGTTGTAATCGGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAA
GATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTAACGTTATCGATCGTGTCTGAGCTCTCAACCTCGAGGGTTATCGTC
TTCCCGGTTAGGGTTTTGACAAAGATCTGCATGCCTCCGCGGAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGCCAAGGTGC
GGCCATCCTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCGATGGTGTC
GGAGCTCTCGACTTCGAGAGTAATAGTTTTGCCAGTCAGGGTTTTCACGAAGATCTGCATATCGAACAGAGCTTTTTCTTGCGAACGAAGGAAGAATTGA
TAATTGTTGCGATCAAGATGATGAAATGATGAGTGAAGCGCTAGAGGTTCGTGCTTGGTTATATAGCAAAGCTAACCGACTCGTTGAACGGTTCA