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Detailed information on CNT30120441


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 6e-99

BLAST vs NONCODE:
NONGMAT000502, E-value = 4e-67

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30620158Citrus clementinaCajanus cajan41.8564.9184.9457forward

Expression of CNT30120441

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MSLCWSGGIPSLSWILAFTLSIVSELSTSRVIVFPVNVLTKICIPPLRRNTRWRVDSFWML*

Sequence

>CNT30120441
ATGAGAAAATTTGAGAATATATATATTTAAAAACTACTGCTTATATTATTATTGCTGATAGAAAGAGGAAATTAGGCCCAAGCGGCTGGCCATTACACAA
TTGTAATTACAAAATAATTAAAGCAAAGCGCCCAATCCAACCTAATTAATTATTATTAGCGCCATCCAATCAAACGCGGACACATCCACATATATTTTTT
TAGAAGTCACCACCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCATCCTCGAGCTGCTTGCCGG
CGAAGATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTAAT
CGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCATTCCTCCCCTCAGGCGCAACACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAG
GTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCG
TGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCATCTGTTAATCGGAACGAGCACGGAAAAGTGACGCCCG
GGGGCCGGTTTATATAGAGATGTTTGCCGACTTGACGAGGAAATATCGCGAGCTAATTCCAAGAAGGTAACGCTTCCACGCACTTAATGCAAACACGCTA
ACGAAGGATCACCGTTCATTTAGCTGACGCTAAAAGTTGGTACTAAACGGCGACAGATCCACGGGTCCCACGACGCGCTGCTCCGCTCCACTACCGTCTC
ATGGTAGCCCACCAACCATTTCGGTCGTTAAGAAAATTAATTATATCCGAAGAAGAAAGAAAACGGCTAGTTATAATATTAAATTAAATTTAAAAAAAAA
TATAATTTAAATTCATTTTGGTAAAGAGTATTGTTGTTTTTTTTATATTTTAGTTTGTGTATATATAAAAATATTCAATGGAAGGTGGTAGC