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Detailed information on CNT30120361


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616204Citrus clementinaSesamum indicum33.3324.2287.13101reverse complement
CNT30711674Citrus clementinaGlycine max25.082586.8476reverse complement
CNT30587665Citrus clementinaMusa acuminata27.7227.189.2984reverse complement
CNT30544156Citrus clementinaBrassica napus25.7425.7489.7478reverse complement
CNT30235645Citrus clementinaBrassica oleracea23.4323.1388.7371reverse complement
CNT30232760Citrus clementinaAnanas comosus25.0816.6786.8476reverse complement
CNT30409088Citrus clementinaPapaver somniferum21.7820.1889.3966forward
CNT30572342Citrus clementinaVitis vinifera20.7911.3192.0663forward
CNT3053266Citrus clementinaAmborella trichopoda25.7425.3288.4678reverse complement
CNT30319113Citrus clementinaAsparagus officinalis20.797.8388.8963forward
CNT30725324Citrus clementinaLupinus angustifolius14.8522.3993.3345reverse complement
CNT3050857Citrus clementinaCucumis sativus26.7326.4787.6581reverse complement

Expression of CNT30120361

Peptides detected in this lncRNA

>peptide 1 (39 aa)
KGGCPNVRGFAGIVGPIRSRPVIHPPTRAGGNRCSVKPA*

>peptide 2 (30 aa)
RWLSKCEGLRRHCWANQEPTRYPSTDESGR*

Sequence

>CNT30120361
AAAGGTGGCTGTCCAAATGTGAGGGGCTTCGCAGGCATTGTTGGGCCAATCAGGAGCCGACCCGTTATCCATCCACCGACGAGAGCGGGAGGTAATCGCT
GCTCTGTGAAACCAGCCTGACGCTTTACCCTCCACTCTAAGACCCAAGAAGCCCAAGAGCCTTCGCTCGGGCCCCTGATTCAACTCTCTACTTGGATCGG
GCAGGCCAGCATAACTCCCGACAAGCCCTTCCTGAGAAGCCCGGCCAAAGTCCAACCACCTCGTTGCCCCACTTGGTGACAGGCTCTCGTCACTGAGCCC
GGC