Detailed information on CNT3012019


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT002991, E-value = 1e-115

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677376Zea maysSetaria viridis22.4310.5397.9248reverse complement
CNT30106312Zea maysOryza longistaminata23.361.629050reverse complement
CNT30583679Zea maysEchinochloa crusgalli20.566.3695.4544reverse complement

Expression of CNT3012019

Peptides detected in this lncRNA

>peptide 1 (31 aa)
PPLAFLINQPRASHYTLVVALFSRVVAPCSN*

Sequence

>CNT3012019
CCTCCACTAGCTTTCCTAATTAATCAGCCAAGGGCGTCCCATTATACCCTTGTGGTAGCACTGTTTTCCCGGGTGGTCGCTCCATGTTCCAATTAACATA
ATGATCTTATCATGAACGATAAATAACAACGGATAACAAAAGTATAATCATGTGTAATGTATCTTCATACCCAAAACCACATAAAGCACTAGCAAGTACT
ACCCAAAAAGTTCA