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Detailed information on CNT30120150


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318042Citrus clementinaCorylus avellana9.327.0187.7257forward
CNT30157112Citrus clementinaPistacia vera34.2652.980.48210forward
CNT3026892Citrus clementinaPopulus trichocarpa29.5332.579.56181forward

Expression of CNT30120150

Peptides detected in this lncRNA

>peptide 1 (99 aa)
SIYIVEWAYSNINWLSLVSCTYGYSSFANTNTGSFVRLSSVYTNALTPNIHMGATTGLSFPCIHIDTTLPYVDRGAFVFQHICKYSNNIRRDLLIQTKG*

>peptide 2 (59 aa)
MGLLQHKLAFPCVLYLRILLLCQHQHWFFCQAFQCLHQRPYPQHSHGCHHRAFLSLHPH*

Sequence

>CNT30120150
CAGCATATACATAGTTGAATGGGCTTACTCCAACATAAACTGGCTTTCCCTTGTGTCCTGTACTTACGGATACTCCTCCTTTGCCAACACCAACACTGGT
TCTTTTGTCAGGCTTTCCAGTGTTTACACCAACGCCCTTACCCCCAACATTCACATGGGTGCCACCACCGGGCTTTCCTTTCCCTGCATCCACATTGACA
CCACCCTTCCCTACGTTGACAGAGGTGCTTTTGTCTTCCAGCACATCTGCAAATATAGTAACAATATTAGAAGAGACCTTTTAATACAGACTAAGGGGTA
GTCTCATAAACAGTGGATCTACGGCAAATTTCTTCTCCTGAACGAGATTTTGAGCCGCTGAAATTTTGGTGGGAACACGCGAAGAAAATATATTCCACAT
TTTTGACATCTATCTGGCTTTAACAGCTTTTGGCATCGGGGAATTTGGCAATACAGTTTTCCAGTAAAGCTCAGGAGAAATGGCAGCATGACTTGCCACC
AGTGCTAGCTGCAAGACAAGCCAGTCCAAAATCTTATTAGAATAAATAACCTATTAAAGAGAGGCAAATGCAGAATTCCAAGGGAAGCTGTTTGTTCAGC
AATCAGGACCATG