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Detailed information on CNT30120137


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 8e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512572Citrus clementinaJuglans regia28.831.8779.92254forward
CNT30617718Citrus clementinaSesamum indicum32.6521.0579.51288forward
CNT30380980Citrus clementinaManihot esculenta31.5231.7780.58278forward
CNT30635730Citrus clementinaCapsicum annuum32.8841.8584.14290forward

Expression of CNT30120137

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MIVTVVILLNCKSTQQNQNAKELMYYNYILSFHKHKINNTIFFLKKVIEQEGPS*

>peptide 2 (39 aa)
MTAAACSSSCFTSSEVSLTLLSFSLIALSLSSMKFPRGE*

Sequence

>CNT30120137
CAGGAAACCAATCAACATTGCACATAATAAGGACTGGAGTAGTTTAAGGTCATAATTGATTTCAAGCTCAGATTCAACTGATACGCATTTACATATTCAG
TTAACACTCCTCTCTCCTGCAGATTCAATGAAGAAACAGCCCCCATTCCTCAGGACCCATAGATACAACTTCAGCCACAAAATCTTCACGCATACATGTT
GTGATTCTACTTAATTTTGAAAAGTCTAAAGCAAGCAGCTAATATTAAGCAGGCACCAATCCACTAATACTAGATAGTTAGTGCTTCCATTCTATACCAA
TTGCGAATTAGGGCAAGATAATCCCAGCACCAAAAATACATAGTAAGTATTCTCATCCAGAATGATTGTAACTGTTGTGATTCTACTTAATTGTAAAAGC
ACACAACAAAATCAAAATGCAAAGGAGCTAATGTATTACAATTACATTCTGTCATTTCATAAACACAAAATCAACAACACAATTTTTTTTTTAAAAAAAG
TTATTGAACAGGAAGGACCTTCCTGACAATCTCTTCACTAAGAGCAGCAATCTGAGAGTCAAGAGACTTAATGGTATCCTCCTTTTGCCTCTCCAAATTA
GCCAAAGCTTCCTGAAGCTCAGCCTCAATTTTCTTCCTCCCCACAGCAAGCTTCTGCTCAACTTCCAACTGAGTCTCCTTCTTCATCTTAGTCAAGGCCG
CCGATATCTCCGCTCTGGCAGCCCTCATGACGGCAGCAGCTTGCTCTTCTAGCTGCTTCACTTCCTCGGAAGTGTCCTTGACGCTGTTGAGCTTTTCCTT
GATAGCATTGTCCCTCTCGTCCATGAAGTTCCCGAGGGGAGAGTAGTAAATCTTGTCCAACGCGAACATCAGAACCAAGAAC